CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22710
KRH26594

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G55880.1	KRH22710	AT3G44590.1	21798944
AT1G55880.1	KRH26594	AT3G44590.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73904	Soybean	cytosol	76.24	76.78
AT1G55880.1	Thale cress	endoplasmic reticulum	75.76	76.48
VIT_19s0015g00380.t01	Wine grape	plastid	75.06	75.77
PGSC0003DMT400057393	Potato	plastid	73.88	74.76
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	73.65	74.35
Bra038025.1-P	Field mustard	plastid	74.59	73.38
CDY52906	Canola	plastid	74.59	73.38
CDY53756	Canola	endoplasmic reticulum	75.29	73.06
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	72.0	70.83
TraesCS4D01G244300.1	Wheat	plastid	70.59	68.03
TraesCS4B01G245100.1	Wheat	plastid	70.59	68.03
TraesCS4A01G079100.1	Wheat	plastid	69.88	67.65
Os03t0215800-01	Rice	plastid	71.53	67.56
EER95270	Sorghum	plastid	71.53	66.96
HORVU4Hr1G067610.1	Barley	plastid	70.35	63.48
Zm00001d028220_P001	Maize	plastid	70.82	61.43
KRH74905	Soybean	cytosol	7.76	41.25
KRH77854	Soybean	cytosol	6.59	37.84
KRH43690	Soybean	cytosol	19.76	36.05
KRG91325	Soybean	cytosol, mitochondrion, nucleus	27.06	35.38
KRH27640	Soybean	cytosol	27.06	35.38
KRH35519	Soybean	cytosol	25.18	35.08
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	26.82	35.08
KRH13764	Soybean	cytosol	25.88	34.27
KRH34052	Soybean	cytosol	25.65	33.64
KRG92757	Soybean	cytosol	25.41	33.44
KRH68699	Soybean	cytosol	25.41	33.23
KRH34037	Soybean	cytosol	25.18	33.13
KRG94935	Soybean	nucleus	25.65	29.38
KRG92761	Soybean	cytosol	22.82	29.31
KRH00797	Soybean	mitochondrion	25.65	29.3
KRH40428	Soybean	mitochondrion	25.65	29.22
KRH64961	Soybean	nucleus, plastid	25.65	29.14
KRH50190	Soybean	nucleus, plastid	24.94	27.25
KRH71273	Soybean	nucleus, plastid	24.24	26.14

Protein Annotations

EntrezGene:100799081	Gene3D:3.40.50.1100	MapMan:35.1	EMBL:ACUP02008494	EnsemblPlantsGene:GLYMA_14G014000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0030170	UniProt:I1M6G6	EnsemblPlants:KRH14231	ProteinID:KRH14231	ProteinID:KRH14231.1	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF35	SUPFAM:SSF53686
TMHMM:TMhelix	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000233BF72	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr14:-:1029711..1032256

Molecular Weight (calculated)

45667.8 Da

IEP (calculated)

9.588

GRAVY (calculated)

-0.178

Length

425 amino acids

Sequence
(BLAST)

001: MAAVAARSTG SVGVGAVIFI SVALTTYFIS KKKKKKKKES RKKKKGLVDA IGNTPLIRIN SLSAATGCQI LGKCEFLNPG GSVKDRVAVQ IIQEALESGQ
101: LRPGGIVTEG SAGSTAISIA TVAPAYGCRT HVVIPDDAAI EKSQILEALG ATVERVRPVS ITHKDHFVNI ARRRASEANE FALKRRNSQQ LNGKEDTEKI
201: NGYESNGCNY SSLFPEDCQG GFFADQFENL ANFRAHYEGT GPEIWEQTNG KLDAFVAAAG TGGTVAGVSK FLQEKNPNIK CFLLDPPGSG LFNKVTRGVM
301: YTKEEAEGRR LKNPFDTITE GIGINRITRN FAMAKLDGAF RGTDREAVEM SRFLLKNDGL FLGSSSAMNC VGAVRVAQAI GTGHTIVTIL CDSGMRHLSK
401: FYDAEYLSQL GLTPKAIGLE FLGVK

Best Arabidopsis Sequence Match ( AT1G55880.1 )
(BLAST)

001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K

Arabidopsis Description

At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.