Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g065470.2.1 | Tomato | peroxisome, plasma membrane | 96.19 | 95.96 |
| VIT_19s0015g00380.t01 | Wine grape | plastid | 78.57 | 78.38 |
| AT1G55880.1 | Thale cress | endoplasmic reticulum | 74.29 | 74.11 |
| KRH14231 | Soybean | mitochondrion | 74.76 | 73.88 |
| Bra038025.1-P | Field mustard | plastid | 74.52 | 72.45 |
| CDY52906 | Canola | plastid | 74.52 | 72.45 |
| GSMUA_Achr3P26040_001 | Banana | endoplasmic reticulum | 73.81 | 71.76 |
| CDY53756 | Canola | endoplasmic reticulum | 74.29 | 71.23 |
| TraesCS4D01G244300.1 | Wheat | plastid | 73.57 | 70.07 |
| TraesCS4B01G245100.1 | Wheat | plastid | 73.57 | 70.07 |
| TraesCS4A01G079100.1 | Wheat | plastid | 72.86 | 69.7 |
| Os03t0215800-01 | Rice | plastid | 72.86 | 68.0 |
| EER95270 | Sorghum | plastid | 73.33 | 67.84 |
| HORVU4Hr1G067610.1 | Barley | plastid | 73.33 | 65.39 |
| KRH73904 | Soybean | cytosol | 62.86 | 62.56 |
| Zm00001d028220_P001 | Maize | plastid | 72.86 | 62.45 |
| PGSC0003DMT400082113 | Potato | cytosol | 25.95 | 33.54 |
| PGSC0003DMT400034224 | Potato | cytosol | 5.71 | 32.88 |
| PGSC0003DMT400016646 | Potato | mitochondrion | 25.71 | 30.77 |
| PGSC0003DMT400000156 | Potato | mitochondrion | 24.29 | 29.39 |
| PGSC0003DMT400059624 | Potato | cytosol, plastid | 26.9 | 29.27 |
| PGSC0003DMT400040030 | Potato | cytosol | 6.9 | 27.1 |
| PGSC0003DMT400021594 | Potato | cytosol | 6.43 | 26.73 |
| PGSC0003DMT400012263 | Potato | cytosol | 6.67 | 26.17 |
| PGSC0003DMT400064098 | Potato | cytosol | 4.52 | 24.36 |
| PGSC0003DMT400080490 | Potato | cytosol, mitochondrion, nucleus, plastid | 6.19 | 19.7 |
Protein Annotations
| EntrezGene:102585362 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0006535 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | UniProt:M1C0Y5 | InterPro:P-phosphate_BS |
| PFAM:PF00291 | EnsemblPlantsGene:PGSC0003DMG400022283 | PGSC:PGSC0003DMG400022283 | EnsemblPlants:PGSC0003DMT400057393 | InterPro:PLP-dep | ScanProsite:PS00901 |
| PANTHER:PTHR10314 | PANTHER:PTHR10314:SF35 | SUPFAM:SSF53686 | TMHMM:TMhelix | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI000295C277 |
| RefSeq:XP_006346141.1 | SEG:seg | : | : | : | : |
Description
Cysteine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400022283]
Coordinates
chr7:+:55465508..55469470
Molecular Weight (calculated)
45080.9 Da
IEP (calculated)
8.557
GRAVY (calculated)
-0.185
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVRTAGAI ATLLSIAIVS YFLCKTTQHK SPRKKKLQRR RTGLVAAIGN TPLIRINSLS DATGCEILGK AEFLNPGGSV KDRVAVKIIE EALESGALAK
101: GGVVTEGSAG STAISLATVA PAYGCRCHVV IPDDAALEKA QILEALGATV ERVRPVSITH RDHFVNIARR RALEASELTS TTRKKSQIDA NDSSQINGHS
201: ISEEKQNMQF SSECKGGFFA DQFENLANFR SHYEGTGPEI WEQTGGKLDA FIAAAGTGGT VAGVSQYLKD QNSNIKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTENFKMA KLDGAFRGTD MEAVEMSRYL LKNDGLFIGS SSAMNCVGAV RVAKALGPGH TIVTILCDSG MRHLSKFHNA
401: EYLSEHGLTP SATGLEFLHS
101: GGVVTEGSAG STAISLATVA PAYGCRCHVV IPDDAALEKA QILEALGATV ERVRPVSITH RDHFVNIARR RALEASELTS TTRKKSQIDA NDSSQINGHS
201: ISEEKQNMQF SSECKGGFFA DQFENLANFR SHYEGTGPEI WEQTGGKLDA FIAAAGTGGT VAGVSQYLKD QNSNIKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTENFKMA KLDGAFRGTD MEAVEMSRYL LKNDGLFIGS SSAMNCVGAV RVAKALGPGH TIVTILCDSG MRHLSKFHNA
401: EYLSEHGLTP SATGLEFLHS
001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K
Arabidopsis Description
At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.