Factsheet for GSMUA_Achr3P26040_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0015g00380.t01	Wine grape	plastid	73.84	75.77
TraesCS4A01G079100.1	Wheat	plastid	75.23	74.03
Os03t0215800-01	Rice	plastid	77.08	74.0
TraesCS4D01G244300.1	Wheat	plastid	75.46	73.92
PGSC0003DMT400057393	Potato	plastid	71.76	73.81
TraesCS4B01G245100.1	Wheat	plastid	75.23	73.7
EER95270	Sorghum	plastid	77.31	73.57
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	71.53	73.4
KRH14231	Soybean	mitochondrion	70.83	72.0
AT1G55880.1	Thale cress	endoplasmic reticulum	69.44	71.26
Bra038025.1-P	Field mustard	plastid	69.68	69.68
CDY52906	Canola	plastid	69.68	69.68
HORVU4Hr1G067610.1	Barley	plastid	75.23	69.0
CDY53756	Canola	endoplasmic reticulum	68.98	68.04
Zm00001d028220_P001	Maize	plastid	76.62	67.55
KRH73904	Soybean	cytosol	60.65	62.09
GSMUA_Achr4P21350_001	Banana	cytosol	26.39	35.08
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	25.46	33.85
GSMUA_Achr9P25760_001	Banana	cytosol	25.23	33.64
GSMUA_Achr11P...	Banana	cytosol	25.23	33.64
GSMUA_Achr2P16640_001	Banana	cytosol	23.38	29.71
GSMUA_Achr5P17120_001	Banana	plastid	26.39	29.69
GSMUA_Achr9P02430_001	Banana	plastid	25.93	29.47
GSMUA_Achr5P19480_001	Banana	mitochondrion	24.31	29.25
GSMUA_Achr8P00260_001	Banana	mitochondrion	22.92	22.6

Protein Annotations

EnsemblPlants:GSMUA_Achr3P26040_001	EnsemblPlants:GSMUA_Achr3T26040_001	EnsemblPlantsGene:GSMUA_Achr3G26040_001	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:P-phosphate_BS	InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314
PANTHER:PTHR10314:SF35	PFAM:PF00291	ScanProsite:PS00901	SEG:seg	SUPFAM:SSF53686	TMHMM:TMhelix
UniParc:UPI000296B290	UniProt:M0SHX0	MapMan:35.1	:	:	:

Description

Cysteine synthase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26040_001]

Coordinates

chr3:+:26027318..26031845

Molecular Weight (calculated)

46538.0 Da

IEP (calculated)

8.712

GRAVY (calculated)

-0.144

Length

432 amino acids

Sequence
(BLAST)

001: MAAVKTADVL TATAAAVLSA ALLSYLLLSG HGFKLPWLRD RGNYRRHKSR GKRNGLVDAV GNTPLIRINS LSDATGCEIL GKAEFLNPGG SVKDRVAVKI
101: IEEALDSGGL MPGGVVTEGS AGSTAISLAT IAPAYGCRCH VVIPDDVAIE KSQIIEALGA TVERVRPVSI THKDHYVNVA RRRALEATNR AAIPREADKI
201: KGIDLLQMNG HAPKQTEGYP CSADNKGGFF ADQFENLANF RAHYEWTGPE IWEQTQGKLH AFVAAAGTGG TIAGISQFLK EKNPNIKCFL IDPPGSGLFN
301: KVTRGVMYTK EEAEGRRLKN PFDTITEGIG INRLTKNFMM AELDGAYRGT DREAVEMSRF LLKKDGLFLG SSSAMNCVGA VRLARSLGPG HTIVTILCDS
401: GMRHLSKFCN AQYLVDHGLT PTATNLEFLD HS

Best Arabidopsis Sequence Match ( AT1G55880.1 )
(BLAST)

001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K

Arabidopsis Description

At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.