Factsheet for GSMUA_Achr4P21350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr8P07520_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	GSMUA_Achr11P...	AT5G54390.1	21798944
AT5G28020.1	GSMUA_Achr8P07520_001	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	87.69	87.96
GSMUA_Achr9P25760_001	Banana	cytosol	87.08	87.35
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	87.08	87.08
KRH68699	Soybean	cytosol	84.31	84.31
KRH27640	Soybean	cytosol	84.0	84.0
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	83.69	83.69
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	83.08	83.08
PGSC0003DMT400082113	Potato	cytosol	82.77	82.77
KRH77854	Soybean	cytosol	18.77	82.43
Bra039708.1-P	Field mustard	cytosol	79.69	80.43
CDY68436	Canola	cytosol	79.69	80.43
KRG91325	Soybean	cytosol, mitochondrion, nucleus	80.31	80.31
AT3G22460.1	Thale cress	cytosol	61.54	80.0
CDY29778	Canola	cytosol, peroxisome, plastid	74.46	79.87
AT4G14880.5	Thale cress	cytosol	79.08	79.81
CDY42795	Canola	cytosol	79.08	79.81
Bra036910.1-P	Field mustard	plastid	78.15	79.62
CDY09039	Canola	cytosol	75.08	78.21
KRH35519	Soybean	cytosol	71.69	76.39
VIT_14s0030g01520.t01	Wine grape	cytosol	75.08	75.54
KRH13764	Soybean	cytosol	72.0	72.9
KRG92757	Soybean	cytosol	70.77	71.21
VIT_14s0030g01550.t01	Wine grape	cytosol	74.46	70.76
KRH34052	Soybean	cytosol	70.15	70.37
KRH34037	Soybean	cytosol	68.92	69.35
CDY69239	Canola	cytosol	67.69	68.54
AT5G28020.1	Thale cress	cytosol	68.0	68.42
CDY41911	Canola	cytosol	67.38	68.22
CDY50768	Canola	cytosol	67.08	67.91
KRH43690	Soybean	cytosol	48.62	67.81
CDX74160	Canola	cytosol	66.77	67.6
AT3G04940.1	Thale cress	cytosol	67.08	67.28
CDY52498	Canola	cytosol	66.46	66.87
Bra036115.1-P	Field mustard	cytosol	66.46	66.87
CDY41913	Canola	cytosol	62.46	66.78
AT5G28030.2	Thale cress	cytosol	65.85	66.25
Solyc01g097950.2.1	Tomato	cytosol	65.85	66.25
CDY19703	Canola	cytosol	65.85	66.25
CDY05586	Canola	cytosol	65.85	66.25
CDY00007	Canola	cytosol	65.54	65.94
CDX86187	Canola	cytosol	61.54	65.79
Bra009985.1-P	Field mustard	cytosol	56.0	65.7
CDX80680	Canola	cytosol	60.31	64.47
Solyc01g097930.2.1	Tomato	cytosol	63.38	63.78
Solyc01g097920.2.1	Tomato	cytosol, plastid	68.92	62.92
Solyc01g097940.1.1	Tomato	plasma membrane	37.85	62.76
GSMUA_Achr5P17120_001	Banana	plastid	73.23	61.98
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	74.15	61.79
CDY00008	Canola	mitochondrion	66.46	61.54
CDY19702	Canola	mitochondrion	66.46	61.54
Bra036114.1-P	Field mustard	cytosol	64.31	61.11
GSMUA_Achr9P02430_001	Banana	plastid	71.38	61.05
KRG92761	Soybean	cytosol	57.23	56.19
Bra001131.1-P	Field mustard	mitochondrion	68.92	56.0
VIT_14s0030g01490.t01	Wine grape	cytosol	74.77	55.35
GSMUA_Achr5P19480_001	Banana	mitochondrion	57.54	52.09
GSMUA_Achr2P16640_001	Banana	cytosol	54.46	52.06
CDY41915	Canola	cytosol	9.85	51.61
Bra020605.1-P	Field mustard	mitochondrion	66.15	49.54
GSMUA_Achr8P00260_001	Banana	mitochondrion	60.62	44.98
Bra040417.1-P	Field mustard	cytosol	42.77	44.55
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	85.85	39.8
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	35.08	26.39

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	InterPro:CysK	InterPro:Cys_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSMUA_Achr4G21350_001
EnsemblPlants:GSMUA_Achr4P21350_001	EnsemblPlants:GSMUA_Achr4T21350_001	UniProt:M0SQU8	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000294EA81	SEG:seg	:	:	:

Description

Cysteine synthase [Source:GMGC_GENE;Acc:GSMUA_Achr4G21350_001]

Coordinates

chr4:+:21854163..21858897

Molecular Weight (calculated)

34356.0 Da

IEP (calculated)

5.265

GRAVY (calculated)

0.131

Length

325 amino acids

Sequence
(BLAST)

001: MAEACPTIAK NVAELIGKTP LVYLNNLTTG CVARVAAKLE MMEPCSSVKD RIGYSMIADA EEKGLIQPGK SVLIEPTSGN TGIGLAFMAA AKGYRLILTM
101: PASMSLERRI ILKAFGAELV LTDPILGMNG AVHKAEELAA KTPNSYILQQ FENLANPRIH YETTGPEIWK GTEGKVDALV SGIGTGGTIT GTGKYLKEQN
201: PEIKLYGIEP SESAVLSGGK PGPHKIQGIG AGFIPGVLDV NLIDEVVQVS SDEAIETAKL LALKEGLLVG ISSGAAAAAA IRIAQRPENE GKLIVVVFPS
301: FGERYLSSVL FQSIKKEAEC MVFEP

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.