Factsheet for GSMUA_Achr8P00260_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03630.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT3G03630.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94935	Soybean	nucleus	57.99	68.46
KRH64961	Soybean	nucleus, plastid	57.99	67.91
TraesCS3D01G332100.1	Wheat	plastid	58.22	67.28
TraesCS3B01G370200.3	Wheat	plastid	57.53	66.84
Os01t0814800-01	Rice	plastid	59.82	66.84
TraesCS3A01G338600.3	Wheat	plastid	57.53	66.49
VIT_08s0056g00820.t01	Wine grape	plastid	59.13	66.41
EES03791	Sorghum	plastid	57.76	65.89
HORVU3Hr1G079890.1	Barley	plastid	57.99	65.13
Bra036448.1-P	Field mustard	plastid	57.76	64.38
CDY21176	Canola	plastid	57.76	64.38
CDY29946	Canola	plastid	57.31	64.03
GSMUA_Achr11P...	Banana	cytosol	47.26	63.89
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	46.58	62.77
AT3G03630.1	Thale cress	plastid	57.53	62.38
GSMUA_Achr9P25760_001	Banana	cytosol	45.89	62.04
GSMUA_Achr4P21350_001	Banana	cytosol	44.98	60.62
GSMUA_Achr5P17120_001	Banana	plastid	50.23	57.29
GSMUA_Achr9P02430_001	Banana	plastid	48.4	55.79
Zm00001d043101_P001	Maize	plastid	23.52	53.09
GSMUA_Achr5P19480_001	Banana	mitochondrion	39.5	48.19
GSMUA_Achr2P16640_001	Banana	cytosol	37.21	47.94
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	22.6	22.92

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CysK	InterPro:Cys_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009643	GO:GO:0009987
GO:GO:0010310	GO:GO:0015979	GO:GO:0016740	GO:GO:0019344	GO:GO:0031977	GO:GO:0090322
EnsemblPlantsGene:GSMUA_Achr8G00260_001	EnsemblPlants:GSMUA_Achr8P00260_001	EnsemblPlants:GSMUA_Achr8T00260_001	UniProt:M0TLC8	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF90	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002961E9B	SEG:seg	:	:

Description

Cysteine synthase [Source:GMGC_GENE;Acc:GSMUA_Achr8G00260_001]

Coordinates

chr8:-:202444..218398

Molecular Weight (calculated)

47557.9 Da

IEP (calculated)

9.476

GRAVY (calculated)

0.104

Length

438 amino acids

Sequence
(BLAST)

001: MAFHNRFTRV FANPILDKVN RVNRFNFLII VFKILDINRT GTAFGRFSIH KSLPRSDKTL PSSQNPSINA ALMAFLSASI LPLSSPHRSR FFPSRPSLSG
101: RVSFDGIIEN KPVAGSAIAV SLRSTAEVET VNIAEDVTQL IGKTPMIYLN KVVEGCVANI AAKLESMEPC RSVKDRIGYS MINDAEERGL IFPRKSILVE
201: PTSGNTGVGI AFAAAARGYK LIATMPASIN LERRVLLRSF GADIVLTDPD KGIKGAVDKA EEIVSRTPNA YMFRQFDNPV NTKIHFETTG PEIWEDTMGG
301: VDIFIASIGT GGTITGAGRY LKMMNKHIKV IGVEPAETSV ICGDNPGYVP SILDVTLLDE VIKVTTTEAI EVARMLALEE GLLIGISSGA AAAAAIHVAK
401: RPENAGKLIA VIFPSFGERY ISTVLFHSIH EEVRKIQK

Best Arabidopsis Sequence Match ( AT3G03630.1 )
(BLAST)

001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY

Arabidopsis Description

CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.