Factsheet for TraesCS3A01G338600.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G274500.1
TraesCS6B01G302000.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G03630.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT3G03630.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT3G03630.1	TraesCS6D01G254800.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G332100.1	Wheat	plastid	98.68	98.68
TraesCS3B01G370200.3	Wheat	plastid	97.89	98.41
HORVU3Hr1G079890.1	Barley	plastid	97.63	94.87
Os01t0814800-01	Rice	plastid	86.54	83.67
EES03791	Sorghum	plastid	81.53	80.47
Zm00001d043101_P001	Maize	plastid	36.94	72.16
KRG94935	Soybean	nucleus	63.85	65.23
KRH64961	Soybean	nucleus, plastid	64.12	64.97
VIT_08s0056g00820.t01	Wine grape	plastid	64.91	63.08
TraesCS2A01G300600.1	Wheat	cytosol	51.19	59.33
CDY21176	Canola	plastid	61.21	59.03
Bra036448.1-P	Field mustard	plastid	61.21	59.03
CDY29946	Canola	plastid	60.95	58.93
AT3G03630.1	Thale cress	plastid	61.48	57.67
GSMUA_Achr8P00260_001	Banana	mitochondrion	66.49	57.53
TraesCS3A01G087100.1	Wheat	plastid	55.94	54.5
TraesCS4A01G401700.1	Wheat	cytosol	43.27	47.26
TraesCS7A01G102800.1	Wheat	cytosol	42.74	46.69
TraesCS7A01G359800.1	Wheat	cytosol	41.95	46.63
TraesCS7A01G102700.1	Wheat	cytosol	42.74	46.55
TraesCS4A01G401600.1	Wheat	cytosol	42.48	46.26
TraesCS5A01G300400.1	Wheat	mitochondrion	46.17	46.05
TraesCS6A01G187300.1	Wheat	cytosol	41.42	46.04
TraesCS5A01G022200.1	Wheat	plastid	50.92	45.09
TraesCS4A01G079100.1	Wheat	plastid	29.29	25.28

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CysK	InterPro:Cys_synth
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009643	GO:GO:0009987	GO:GO:0010310
GO:GO:0015979	GO:GO:0016740	GO:GO:0031977	GO:GO:0090322	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF90	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	EnsemblPlantsGene:TraesCS3A01G338600	EnsemblPlants:TraesCS3A01G338600.3	InterPro:Trypto_synt_PLP_dependent	TIGR:cd01561	SEG:seg

Description

No Description!

Coordinates

chr3A:-:585037118..585039853

Molecular Weight (calculated)

40234.0 Da

IEP (calculated)

6.551

GRAVY (calculated)

0.183

Length

379 amino acids

Sequence
(BLAST)

001: MAMASPPACS LLLPAIPSAP AYASVPRAPR FLTCPRAVTA HRPLPTASSP KVAAPAAIEI PEEYADDVEA VNIAVDVTQL IGKTPMVYLN NVVEGCVANI
101: AAKLEYMGPC RSVKDRIALS MISDAEEKGL ISPNKTILVE PTTGNTGIGL AAVAAARGYK MIATMPSSID VERRILVRAF GADIVLTDPT TGLKGAVDKA
201: EEIVSKTPNA YMFQQFNNSA NSEIHFQTTG PEIWEDTLGT VDILVASIGT GDTITGTGRY LKMMNRDIKV IGVEPAETSV ISGDKPGYIP SILDVQLLDE
301: VVKVTTAEAV DVARLLALKE GLLVGISSGA AAIAAINVAK RPENAGKLIA VIFPSFGERY ISSILFRPIY NSVRRMRKR

Best Arabidopsis Sequence Match ( AT3G03630.1 )
(BLAST)

001: MAFASPSLRL LPQSPLGRIT SKLHRFSTAK LSLFSFHHDS SSSLAVRTPV SSFVVGAISG KSSTGTKSKS KTKRKPPPPP PVTTVAEEQH IAESETVNIA
101: EDVTQLIGST PMVYLNRVTD GCLADIAAKL ESMEPCRSVK DRIGLSMINE AENSGAITPR KTVLVEPTTG NTGLGIAFVA AAKGYKLIVT MPASINIERR
201: MLLRALGAEI VLTNPEKGLK GAVDKAKEIV LKTKNAYMFQ QFDNTANTKI HFETTGPEIW EDTMGNVDIF VAGIGTGGTV TGTGGFLKMM NKDIKVVGVE
301: PSERSVISGD NPGYLPGILD VKLLDEVFKV SNGEAIEMAR RLALEEGLLV GISSGAAAVA AVSLAKRAEN AGKLITVLFP SHGERYITTA LFSSINREVQ
401: EMRY

Arabidopsis Description

CS26Probable S-sulfocysteine synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22682]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.