CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	96.31	96.31
KRH27640	Soybean	cytosol	88.62	88.62
KRG91325	Soybean	cytosol, mitochondrion, nucleus	86.46	86.46
GSMUA_Achr4P21350_001	Banana	cytosol	84.31	84.31
KRH77854	Soybean	cytosol	19.08	83.78
GSMUA_Achr9P25760_001	Banana	cytosol	83.38	83.64
KXG24064	Sorghum	cytosol	83.08	83.08
Zm00001d031136_P003	Maize	plasma membrane	82.77	82.77
GSMUA_Achr11P...	Banana	cytosol	82.46	82.72
TraesCS5D01G027600.1	Wheat	cytosol, golgi	81.54	81.54
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	81.23	81.23
KRH35519	Soybean	cytosol	74.77	79.67
HORVU3Hr1G040910.1	Barley	mitochondrion	8.0	76.47
Os12t0625000-01	Rice	plasma membrane	80.92	75.79
KRH13764	Soybean	cytosol	73.54	74.45
TraesCS2B01G316800.1	Wheat	cytosol	74.46	74.01
KRG92757	Soybean	cytosol	73.23	73.68
TraesCS2A01G300600.1	Wheat	cytosol	73.54	73.09
KRH34037	Soybean	cytosol	71.69	72.14
KRH34052	Soybean	cytosol	71.69	71.91
HORVU2Hr1G074630.2	Barley	cytosol	63.08	70.69
KRH43690	Soybean	cytosol	49.23	68.67
TraesCS2D01G298600.2	Wheat	cytosol	74.15	67.32
KXG26295	Sorghum	cytosol	71.69	66.57
Zm00001d003717_P001	Maize	cytosol	71.69	66.19
HORVU5Hr1G015070.1	Barley	extracellular	13.23	63.24
TraesCS5A01G022200.1	Wheat	plastid	81.23	61.68
KRH50190	Soybean	nucleus, plastid	73.54	61.44
HORVU5Hr1G005980.2	Barley	plastid	81.23	60.41
KRH71273	Soybean	nucleus, plastid	73.23	60.41
TraesCS5B01G018700.3	Wheat	plastid	81.23	60.14
KRG92761	Soybean	cytosol	58.77	57.7
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	32.62	56.68
KRH74905	Soybean	cytosol	13.85	56.25
KRG94935	Soybean	nucleus	60.92	53.37
KRH40428	Soybean	mitochondrion	60.92	53.08
KRH00797	Soybean	mitochondrion	60.62	52.96
KRH64961	Soybean	nucleus, plastid	60.92	52.94
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	89.85	41.65
HORVU1Hr1G031220.3	Barley	plastid	45.85	36.61
KRH14231	Soybean	mitochondrion	33.23	25.41
KRH73904	Soybean	cytosol	27.08	20.85

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100101865	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	EMBL:ACUP02002121
EMBL:BT099087	UniProt:C6TMX6	InterPro:CysK	InterPro:Cys_synth	EnsemblPlantsGene:GLYMA_03G244800	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	ProteinID:KRH68697.1	ProteinID:KRH68698.1
EnsemblPlants:KRH68699	ProteinID:KRH68699	ProteinID:KRH68699.1	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	MetaCyc:PWY-6936	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0001B172EF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:44222741..44228257

Molecular Weight (calculated)

34437.0 Da

IEP (calculated)

5.304

GRAVY (calculated)

0.062

Length

325 amino acids

Sequence
(BLAST)

001: MAVEKLSIAK DVTELIGKTP LVYLNRIVDG CVAKVAAKLE MMEPCSSVKD RIGYSMIVDA EEKGFITPGE SVLIEPTSGN TGIGLAFMAA AKGYKLIITM
101: PSSMSLERRT ILRAFGAELV LTDPAKGMKG AVQKAEEIRD KTPNSYILQQ FENPANPKIH YETTGPEIWK GSSGKVDALV SGIGTGGTIT GAGKYLKDQN
201: PDIKLYGIEP VESPILSGGK PGPHKIQGIG AGFIPGVLDV DLLDEVVQIS SEEAIETAKL LALKEGLLVG ISSGAAAAAA IKIAKRPENA GKLIIAVFPS
301: FGERYLSSVL FESVKREAES MVFEP

Best Arabidopsis Sequence Match ( AT4G14880.1 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.