Factsheet for HORVU5Hr1G005980.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G087990.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	HORVU6Hr1G087990.4	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040910.1	Barley	mitochondrion	7.78	100.0
TraesCS5D01G027600.1	Wheat	cytosol, golgi	73.46	98.77
Zm00001d031136_P003	Maize	plasma membrane	67.05	90.15
KXG24064	Sorghum	cytosol	67.05	90.15
Os12t0625000-01	Rice	plasma membrane	68.42	86.17
TraesCS5A01G022200.1	Wheat	plastid	83.75	85.51
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	63.39	85.23
TraesCS5B01G018700.3	Wheat	plastid	83.98	83.6
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	62.01	83.38
PGSC0003DMT400082113	Potato	cytosol	61.78	83.08
Bra039708.1-P	Field mustard	cytosol	60.64	82.3
CDY68436	Canola	cytosol	60.64	82.3
AT4G14880.5	Thale cress	cytosol	60.41	81.99
CDY42795	Canola	cytosol	60.18	81.68
KRH68699	Soybean	cytosol	60.41	81.23
Bra036910.1-P	Field mustard	plastid	59.27	81.19
CDY29778	Canola	cytosol, peroxisome, plastid	56.29	81.19
KRH27640	Soybean	cytosol	60.18	80.92
AT3G22460.1	Thale cress	cytosol	46.22	80.8
CDY09039	Canola	cytosol	57.21	80.13
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	59.5	80.0
KRH77854	Soybean	cytosol	13.27	78.38
HORVU5Hr1G015070.1	Barley	extracellular	12.13	77.94
KRG91325	Soybean	cytosol, mitochondrion, nucleus	57.89	77.85
KRH35519	Soybean	cytosol	51.72	74.1
VIT_14s0030g01520.t01	Wine grape	cytosol	54.46	73.68
KRH13764	Soybean	cytosol	53.55	72.9
VIT_14s0030g01550.t01	Wine grape	cytosol	55.38	70.76
HORVU2Hr1G074630.2	Barley	cytosol	46.91	70.69
KRG92757	Soybean	cytosol	52.17	70.59
KRH34052	Soybean	cytosol	51.72	69.75
KRH43690	Soybean	cytosol	36.61	68.67
CDY69239	Canola	cytosol	50.11	68.22
AT5G28020.1	Thale cress	cytosol	50.34	68.11
CDY41911	Canola	cytosol	49.66	67.6
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	28.83	67.38
CDY50768	Canola	cytosol	49.43	67.29
CDX74160	Canola	cytosol	49.43	67.29
Solyc01g097950.2.1	Tomato	cytosol	49.43	66.87
KRH34037	Soybean	cytosol	49.43	66.87
CDY52498	Canola	cytosol	49.43	66.87
Bra036115.1-P	Field mustard	cytosol	49.43	66.87
AT3G04940.1	Thale cress	cytosol	49.43	66.67
CDY05586	Canola	cytosol	48.97	66.25
CDX86187	Canola	cytosol	46.0	66.12
CDY19703	Canola	cytosol	48.74	65.94
CDY00007	Canola	cytosol	48.74	65.94
CDY41913	Canola	cytosol	45.77	65.79
Bra009985.1-P	Field mustard	cytosol	41.65	65.7
AT5G28030.2	Thale cress	cytosol	48.51	65.63
CDX80680	Canola	cytosol	45.54	65.46
Solyc01g097930.2.1	Tomato	cytosol	47.83	64.71
Solyc01g097940.1.1	Tomato	plasma membrane	28.83	64.29
Solyc01g097920.2.1	Tomato	cytosol, plastid	52.17	64.04
CDY19702	Canola	mitochondrion	50.11	62.39
CDY00008	Canola	mitochondrion	50.11	62.39
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	54.92	61.54
Bra036114.1-P	Field mustard	cytosol	47.14	60.23
HORVU7Hr1G023500.1	Barley	cytosol	13.73	56.6
Bra001131.1-P	Field mustard	mitochondrion	50.11	54.75
KRG92761	Soybean	cytosol	40.96	54.08
VIT_14s0030g01490.t01	Wine grape	cytosol	54.23	53.99
HORVU2Hr1G072450.2	Barley	cytosol	10.98	52.17
HORVU3Hr1G079890.1	Barley	plastid	45.31	50.77
Bra020605.1-P	Field mustard	mitochondrion	48.97	49.31
HORVU7Hr1G021860.7	Barley	cytosol	38.9	48.85
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	38.9	48.57
CDY41915	Canola	cytosol	6.64	46.77
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	47.37	45.39
Bra040417.1-P	Field mustard	cytosol	31.81	44.55
HORVU7Hr1G021840.21	Barley	plastid	37.3	43.35
HORVU1Hr1G031220.3	Barley	plastid	39.59	42.51
HORVU6Hr1G063480.6	Barley	endoplasmic reticulum	37.99	41.92
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	62.93	39.23
HORVU4Hr1G067610.1	Barley	plastid	24.49	22.72

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	UniProt:A0A287Q8X7	InterPro:CysK
InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344
EnsemblPlantsGene:HORVU5Hr1G005980	EnsemblPlants:HORVU5Hr1G005980.2	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent
UniParc:UPI000B46416D	SEG:seg	:	:	:	:

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A287Q8X7]

Coordinates

chrchr5H:+:9855357..9863177

Molecular Weight (calculated)

45426.6 Da

IEP (calculated)

9.872

GRAVY (calculated)

-0.178

Length

437 amino acids

Sequence
(BLAST)

001: PSPAASLKAA TPSTHIRRRQ TPSRFNERRP SGPPAAGPTR SVTVHRGQRL PAGPPSSGPN LLHQPRLYKA SPPPPAPPPT TSTTGQPAAA ATSSTSSSGR
101: TASLPNRSSG GGMGEASTPA IARDVTELIG NTPLVYLNKV TDGCVGRVAA KLESMEPCSS VKDRIGYSMI TDAEEKGFIV PGKSVLIEPT SGNTGIGLAF
201: MAAAKGYRLV LTMPASMSME RRIILKAFGA ELILTDPLLG MKGAVQKAEE LAAKTPNSYI LQQFENAANP KIHYETTGPE IWKGTGGKID GLVSGIGTGG
301: TITGSGKYLK EQNPNIKLYG VEPTESAVLN GGKPGPHKIQ GIGAGFIPGV LDVDIIDETV QVSSDESIEM AKSLALKEGL LVGISSGAAA AAAIKVAQRP
401: ENAGKLFVVV FPSFGERYLS SVLFHSIKKE AESMVVE

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.