Factsheet for HORVU2Hr1G000280.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:

golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plastid
Any Predictor:	golgi, peroxisome, plastid
MultiLoc:	golgi
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G300400.1	Wheat	mitochondrion	77.85	93.42
TraesCS5B01G300800.1	Wheat	mitochondrion	77.41	93.39
Os04t0165700-01	Rice	mitochondrion	69.08	83.55
HORVU7Hr1G023500.1	Barley	cytosol	19.08	82.08
EES11801	Sorghum	mitochondrion	69.08	81.61
Zm00001d004413_P002	Maize	mitochondrion	68.2	81.41
GSMUA_Achr5P19480_001	Banana	mitochondrion	61.62	78.27
KRH74905	Soybean	cytosol	12.94	73.75
PGSC0003DMT400000156	Potato	mitochondrion	55.04	72.33
Solyc10g012370.2.1	Tomato	mitochondrion	54.82	71.23
PGSC0003DMT400016646	Potato	mitochondrion	54.39	70.66
KRH00797	Soybean	mitochondrion	57.46	70.43
KRH40428	Soybean	mitochondrion	57.46	70.24
Bra007604.1-P	Field mustard	mitochondrion	56.58	70.11
AT3G61440.1	Thale cress	mitochondrion	56.36	69.84
CDX71737	Canola	mitochondrion	56.36	69.84
Solyc01g094790.2.1	Tomato	plastid	54.61	69.75
VIT_15s0046g02300.t01	Wine grape	mitochondrion	56.58	69.54
CDY43932	Canola	mitochondrion	55.92	69.29
Bra014436.1-P	Field mustard	mitochondrion	55.7	69.02
CDX89116	Canola	mitochondrion	55.7	69.02
HORVU3Hr1G040910.1	Barley	mitochondrion	5.04	67.65
CDY48919	Canola	endoplasmic reticulum	46.71	67.62
PGSC0003DMT400021594	Potato	cytosol	14.91	67.33
PGSC0003DMT400034224	Potato	cytosol	10.75	67.12
VIT_04s0044g00250.t01	Wine grape	mitochondrion	52.41	66.57
PGSC0003DMT400064098	Potato	cytosol	10.75	62.82
PGSC0003DMT400040030	Potato	cytosol	14.04	59.81
HORVU2Hr1G074630.2	Barley	cytosol	37.5	58.97
PGSC0003DMT400012263	Potato	cytosol	13.82	58.88
Solyc04g058120.1.1	Tomato	mitochondrion	11.4	57.14
HORVU5Hr1G015070.1	Barley	extracellular	8.11	54.41
HORVU7Hr1G021860.7	Barley	cytosol	38.6	50.57
HORVU2Hr1G072450.2	Barley	cytosol	10.09	50.0
HORVU5Hr1G005980.2	Barley	plastid	45.39	47.37
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	35.75	46.57
HORVU3Hr1G079890.1	Barley	plastid	39.25	45.9
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	18.64	45.45
HORVU7Hr1G021840.21	Barley	plastid	36.18	43.88
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	12.28	42.42
HORVU6Hr1G063480.6	Barley	endoplasmic reticulum	34.87	40.15
CDY68838	Canola	mitochondrion	11.4	38.24
HORVU1Hr1G031220.3	Barley	plastid	25.0	28.01
HORVU4Hr1G067610.1	Barley	plastid	23.46	22.72

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CAS
InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019499	GO:GO:0050017
EnsemblPlantsGene:HORVU2Hr1G000280	EnsemblPlants:HORVU2Hr1G000280.3	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	TMHMM:TMhelix
InterPro:Trypto_synt_PLP_dependent	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:766431..831248

Molecular Weight (calculated)

49219.9 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.084

Length

456 amino acids

Sequence
(BLAST)

001: MLSTPGSSCC CCCRVEKGEE STMEEEASPP PPRLEAPARR DLFLMSLITI LSISLLWFGA LALRCWMVVY VCQWCARAPN QRREMERMVM RLMRNKSLLA
101: GASSRGGGGL ASSSIVDSSP FSTLQQQQQE DPGVLNIRDT AAHLIGRTPL VYLNKVTEGC GARVAAKLEF LQPSFSVKDR PAISMIEDAE KKGLITPGKT
201: TLIEPTSGNM GIGLAFMAAL KGYELVLTMP SYTSLERRVV MKAFGAQLVL TDPTKGMGGT VRKATQLYDN HPSAFMLQQF ENPANVQVHY ETTGPEIWED
301: TLGQVDIFVM GIGSGGTVTG VGKYLKEKNP NAKIYGVEPA EANVLNGGKP GPHLITGNGV GFKPDILDMD IMEKVLEVKG EDAVKMAQQL ALQEGLLVGI
401: SSGANTVAAI ELAKRPENKG KLIVTVHPSA GERYLSSALF EGLRKEAEAM QPVPVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.