Factsheet for Zm00001d004413_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11801	Sorghum	mitochondrion	92.15	91.19
Os04t0165700-01	Rice	mitochondrion	86.13	87.27
TraesCS5A01G300400.1	Wheat	mitochondrion	82.46	82.89
TraesCS5B01G300800.1	Wheat	mitochondrion	81.68	82.54
GSMUA_Achr5P19480_001	Banana	mitochondrion	75.92	80.78
HORVU7Hr1G023500.1	Barley	cytosol	21.47	77.36
PGSC0003DMT400000156	Potato	mitochondrion	67.28	74.06
Solyc10g012370.2.1	Tomato	mitochondrion	66.75	72.65
KRH74905	Soybean	cytosol	15.18	72.5
KRH40428	Soybean	mitochondrion	69.9	71.58
PGSC0003DMT400016646	Potato	mitochondrion	65.71	71.51
KRH00797	Soybean	mitochondrion	69.63	71.51
Solyc01g094790.2.1	Tomato	plastid	66.49	71.15
Bra007604.1-P	Field mustard	mitochondrion	68.06	70.65
CDX71737	Canola	mitochondrion	68.06	70.65
CDY43932	Canola	mitochondrion	67.8	70.38
PGSC0003DMT400021594	Potato	cytosol	18.59	70.3
CDX89116	Canola	mitochondrion	67.54	70.11
Bra014436.1-P	Field mustard	mitochondrion	67.54	70.11
PGSC0003DMT400034224	Potato	cytosol	13.35	69.86
VIT_15s0046g02300.t01	Wine grape	mitochondrion	67.8	69.81
AT3G61440.1	Thale cress	mitochondrion	67.02	69.57
CDY48919	Canola	endoplasmic reticulum	56.81	68.89
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	81.41	68.2
VIT_04s0044g00250.t01	Wine grape	mitochondrion	63.35	67.41
PGSC0003DMT400064098	Potato	cytosol	12.83	62.82
PGSC0003DMT400040030	Potato	cytosol	17.28	61.68
Zm00001d031136_P003	Maize	plasma membrane	51.83	60.92
PGSC0003DMT400012263	Potato	cytosol	17.02	60.75
Solyc04g058120.1.1	Tomato	mitochondrion	13.87	58.24
Zm00001d003717_P001	Maize	cytosol	51.83	56.25
Zm00001d040235_P005	Maize	plastid	52.88	51.01
Zm00001d008379_P001	Maize	plastid	52.62	50.5
Zm00001d045327_P001	Maize	cytosol, extracellular	45.29	50.0
Zm00001d045340_P004	Maize	cytosol	45.29	48.87
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	15.45	44.7
Zm00001d045344_P001	Maize	mitochondrion	23.04	41.31
Zm00001d045347_P001	Maize	mitochondrion	23.04	41.31
Zm00001d045341_P003	Maize	mitochondrion	22.77	40.85
Zm00001d045350_P001	Maize	mitochondrion	20.68	37.62
CDY68838	Canola	mitochondrion	13.35	37.5
Zm00001d043101_P001	Maize	plastid	16.49	32.47
Zm00001d028220_P001	Maize	plastid	28.01	21.84

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	EntrezGene:100216722	Gene3D:3.40.50.1100	MapMan:50.2.5
EMBL:BT066141	UniProt:C0PCX2	InterPro:CAS	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016829	GO:GO:0019344	GO:GO:0019499	GO:GO:0050017
EMBL:HM013748	ProteinID:ONM18867.1	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent
UniParc:UPI000194B470	EnsemblPlantsGene:Zm00001d004413	EnsemblPlants:Zm00001d004413_P002	EnsemblPlants:Zm00001d004413_T002	SEG:seg	:

Description

Cysteine synthase

Coordinates

chr2:+:110314499..110316622

Molecular Weight (calculated)

40798.8 Da

IEP (calculated)

9.399

GRAVY (calculated)

-0.112

Length

382 amino acids

Sequence
(BLAST)

001: MERMLARLMR RRSSVPLSGL LHHGGAPAPL QAAGATGASP LILSHQQQQQ HTAASAVLPG LKIRDSASQL IGRTPMVYLN KVTEGCGARV AAKLEFLQPS
101: FSVKDRPAIS MLEDAEKRGL ITPGKTTLIE PTSGNMGIGL AFMAALKGYE LVLTMPSYTS LERRVTMRAF GANLVLTDPA KGMGGTVRKA TELYERHPSA
201: HMLQQFQNPA NVKVHYDTTG PEIWEDTLGQ VDIFVMGIGS GGTVTGVGKY LKEKNPNAKI YGVEPAEANV LNGGKPGPHL ITGNGVGFKP DILDMDVMEK
301: VLEVKGEDAV KMARELAVKE GLLVGISSGA NTVAALELAK RPENKGKLIV TVLPSLGERY LSSALFDELR KEAQAMEPVA VD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.