Factsheet for Solyc01g094790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

nucleus: 30535734
plasma membrane: 30535734

plastid: 20363867
plastid: 22908117
plastid: 26371478

gfp PMID: 30535734 doi

D Liu, J Lu, H Li, J Wang, Y Pei

College of Life Science, Shanxi University, Taiyuan, 030006, China., College of Life Science, Shanxi University, Taiyuan, 030006, China. peiyanxi@sxu.edu.cn., Scientific Instrument Center, Shanxi University, Taiyuan, 030006, China.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000156	Potato	mitochondrion	96.08	98.85
Solyc10g012370.2.1	Tomato	mitochondrion	82.35	83.76
VIT_15s0046g02300.t01	Wine grape	mitochondrion	84.03	80.86
VIT_04s0044g00250.t01	Wine grape	mitochondrion	80.11	79.67
KRH40428	Soybean	mitochondrion	82.35	78.82
KRH00797	Soybean	mitochondrion	82.07	78.76
KRH74905	Soybean	cytosol	17.37	77.5
AT3G61440.1	Thale cress	mitochondrion	77.31	75.0
Bra007604.1-P	Field mustard	mitochondrion	77.31	75.0
CDX89116	Canola	mitochondrion	77.03	74.73
CDX71737	Canola	mitochondrion	77.03	74.73
Bra014436.1-P	Field mustard	mitochondrion	77.03	74.73
CDY43932	Canola	mitochondrion	76.75	74.46
CDY48919	Canola	endoplasmic reticulum	64.71	73.33
GSMUA_Achr5P19480_001	Banana	mitochondrion	72.55	72.14
Solyc04g058120.1.1	Tomato	mitochondrion	17.37	68.13
Os04t0165700-01	Rice	mitochondrion	71.15	67.37
EES11801	Sorghum	mitochondrion	72.55	67.1
HORVU7Hr1G023500.1	Barley	cytosol	19.89	66.98
TraesCS5B01G300800.1	Wheat	mitochondrion	70.59	66.67
Zm00001d004413_P002	Maize	mitochondrion	71.15	66.49
TraesCS5A01G300400.1	Wheat	mitochondrion	70.03	65.79
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	52.94	58.15
Solyc01g097930.2.1	Tomato	cytosol	49.86	55.11
Solyc01g097940.1.1	Tomato	plasma membrane	30.25	55.1
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	69.75	54.61
Solyc01g097950.2.1	Tomato	cytosol	49.02	54.18
Solyc08g014340.2.1	Tomato	plastid	54.9	50.78
Solyc01g097920.2.1	Tomato	cytosol, plastid	49.86	50.0
CDY68838	Canola	mitochondrion	14.85	38.97
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	28.57	24.23

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CAS
InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0019344	GO:GO:0019499	GO:GO:0030170	GO:GO:0050017	UniProt:K4AZL9	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686
EnsemblPlantsGene:Solyc01g094790.2	EnsemblPlants:Solyc01g094790.2.1	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002768B5E
SEG:seg	:	:	:	:	:

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:K4AZL9]

Coordinates

chr1:+:86196210..86198926

Molecular Weight (calculated)

38891.3 Da

IEP (calculated)

8.366

GRAVY (calculated)

-0.190

Length

357 amino acids

Sequence
(BLAST)

001: MASLSRFLKK RSLDYNNVDL MRAASNRLFS TQLPHTNIKS EVSQLIGKTP MVYLKKVTEG CGAYIAVKQE MFQPTSSIKD RPALAMINDA EKKGLISPEK
101: TTLIEPTSGN MGISMAFMAA MKGYKMVLTM PSYTSMERRV TMRAFGADLI LTDPTKGMGG TVKKAYDLLE STPNAFMLQQ FSNPANTQVH FDTTGPEIWE
201: ESLGNVDIFV MGIGSGGTVT GVGQYLKSKN PNVKIYGLEP TESNILNGGK PGPHHITGNG VGFKPDILDM DLMEEVLMVS SEDAVNMARE LAVKEGLMVG
301: ISSGANTVAA LRLAQKPENK GKLIVTVHAS FGERYLSSVL YQDLRKEAEN MQPISVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.