Factsheet for Os04t0165700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 19181864

mitochondrion: 19010998
mitochondrion: 23027867

gfp PMID: 19181864 doi

KW Lai, CP Yau, YC Tse, L Jiang, WK Yip

School of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong, China.

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11801	Sorghum	mitochondrion	90.19	88.08
Zm00001d004413_P002	Maize	mitochondrion	87.27	86.13
TraesCS5A01G300400.1	Wheat	mitochondrion	83.82	83.16
TraesCS5B01G300800.1	Wheat	mitochondrion	83.29	83.07
GSMUA_Achr5P19480_001	Banana	mitochondrion	78.51	82.45
HORVU7Hr1G023500.1	Barley	cytosol	21.75	77.36
PGSC0003DMT400000156	Potato	mitochondrion	68.17	74.06
KRH74905	Soybean	cytosol	15.65	73.75
Solyc10g012370.2.1	Tomato	mitochondrion	68.44	73.5
PGSC0003DMT400016646	Potato	mitochondrion	67.37	72.36
KRH00797	Soybean	mitochondrion	70.82	71.77
KRH40428	Soybean	mitochondrion	70.82	71.58
Solyc01g094790.2.1	Tomato	plastid	67.37	71.15
Bra007604.1-P	Field mustard	mitochondrion	68.7	70.38
CDX71737	Canola	mitochondrion	68.7	70.38
VIT_15s0046g02300.t01	Wine grape	mitochondrion	68.97	70.08
CDY43932	Canola	mitochondrion	67.9	69.57
AT3G61440.1	Thale cress	mitochondrion	67.64	69.29
Bra014436.1-P	Field mustard	mitochondrion	67.64	69.29
CDX89116	Canola	mitochondrion	67.64	69.29
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	83.55	69.08
VIT_04s0044g00250.t01	Wine grape	mitochondrion	64.72	67.97
CDY48919	Canola	endoplasmic reticulum	56.5	67.62
PGSC0003DMT400021594	Potato	cytosol	18.04	67.33
PGSC0003DMT400034224	Potato	cytosol	13.0	67.12
PGSC0003DMT400064098	Potato	cytosol	13.26	64.1
PGSC0003DMT400040030	Potato	cytosol	17.24	60.75
PGSC0003DMT400012263	Potato	cytosol	16.71	58.88
Solyc04g058120.1.1	Tomato	mitochondrion	14.06	58.24
Os12t0625000-01	Rice	plasma membrane	52.52	57.06
Os01t0978100-01	Rice	plastid	53.32	51.02
Os06t0149700-00	Rice	cytosol	44.56	49.56
Os06t0149900-01	Rice	cytosol	45.36	49.28
Os06t0564700-01	Rice	cytosol	43.24	47.66
Os06t0564500-01	Rice	cytosol	44.56	47.06
Os01t0814800-01	Rice	plastid	48.01	46.17
Os02t0222100-01	Rice	cytosol	13.0	43.75
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	14.85	42.42
Os06t0564400-00	Rice	cytosol	28.91	42.41
CDY68838	Canola	mitochondrion	14.06	38.97
Os03t0215800-01	Rice	plastid	29.18	24.44

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	EntrezGene:4335048	MapMan:50.2.5
EMBL:AK102512	ProteinID:BAF14049.1	ProteinID:BAS87872.1	ProteinID:CAE02117.2	InterPro:CAS	InterPro:CysK
InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344
GO:GO:0019499	GO:GO:0030170	GO:GO:0050017	InterPro:IPR006311	EnsemblPlantsGene:Os04g0165700	EnsemblPlants:Os04t0165700-01
InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PFscan:PS51318	PANTHER:PTHR10314
PANTHER:PTHR10314:SF80	UniProt:Q7XS58	SUPFAM:SSF53686	InterPro:TAT_signal	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniParc:UPI00001B1030	RefSeq:XP_015636262.1	SEG:seg	:	:

Description

beta-cyanoalanine synthaseCysteine synthase (EC 2.5.1.47). (Os04t0165700-01)

Coordinates

chr4:-:4457411..4461765

Molecular Weight (calculated)

40156.1 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.059

Length

377 amino acids

Sequence
(BLAST)

001: MERALMSLMR RRSLLQSGGR APPAMAAAAG GSPFFSTLQQ AAAADPVQSP GILPGLKIRD SASQLIGRTP MVYLNKVTEG CGARIAAKLE FLQPSFSVKD
101: RPAISMLEDA EKKGLITPGK TTLIEPTSGN MGIGLAFMAA LKGYELILTM PSYTSLERRV TMRAFGAKLV LTDPTKGMGG TVRKAAELYE NHPSAFMLQQ
201: FENPANVKVH YETTGPEIWE DTLGQVDIFV MGIGSGGTVT GVGKYLKEKN PNAKIYGVEP AEANVLNGGK PGPHLITGNG VGFKPEILNM DIMEKVIEVK
301: GEDAVKMARE LALKEGLLVG ISSGANTVAA LELAKKPENK GKLIVTVLPS LGERYLSSAL FEELRAEAEA MQPVPVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.