Factsheet for Os06t0564500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G363000.1	Wheat	cytosol	79.27	83.48
TraesCS7A01G359800.1	Wheat	cytosol	79.27	82.99
Os06t0564700-01	Rice	cytosol	75.35	78.66
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	74.79	76.29
Os06t0564400-00	Rice	cytosol	52.94	73.54
Os06t0149900-01	Rice	cytosol	67.51	69.45
Os02t0222100-01	Rice	cytosol	21.29	67.86
Os06t0149700-00	Rice	cytosol	63.59	66.96
Os12t0625000-01	Rice	plasma membrane	47.62	48.99
Os04t0165700-01	Rice	mitochondrion	47.06	44.56
Os01t0978100-01	Rice	plastid	47.34	42.89
Os01t0814800-01	Rice	plastid	45.1	41.07
Os03t0215800-01	Rice	plastid	28.01	22.22

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	EntrezGene:4341321	MapMan:50.2.5	EMBL:AK062038
ProteinID:BAD53765.1	ProteinID:BAF19798.1	ProteinID:BAS98271.1	InterPro:CysK	InterPro:Cys_synth	ProteinID:EEE65896.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016829	GO:GO:0030170	EnsemblPlantsGene:Os06g0564500	EnsemblPlants:Os06t0564500-01
PFAM:PF00291	InterPro:PLP-dep	PANTHER:PTHR10314	PANTHER:PTHR10314:SF114	UniProt:Q5Z8Y9	SUPFAM:SSF53686
TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI00000A6A7E	RefSeq:XP_015641630.1	SEG:seg

Description

Cysteine synthase (EC 4.2.99.8). (Os06t0564500-01)

Coordinates

chr6:-:21700599..21703282

Molecular Weight (calculated)

38474.6 Da

IEP (calculated)

4.633

GRAVY (calculated)

-0.147

Length

357 amino acids

Sequence
(BLAST)

001: MGEEIKNGEE GPDMAAPGEE EQEQGRKGIP SLLSSREENI ASNITQLIGW TPLVEMKNIA KNEGVQARLV GKMEAYQPLC SVKDRSALRM IEDAEEKGLI
101: TPGVTTLIEP TSGNLGIGLV LVAVQKGYRF IAVMPAKYSL DKQMLLRFLG AELILTDPAI GFNGMMDKVE ELMKSIPNSH CLNQVTNPAN PEAHFMWTGP
201: EIWKDTAGKV DVFVASVGSG GTLTGVGRYL KMKNPSINIV CVEPSESPVI SGGSPGPHKI QGTGAGFIPE ILDKSVIDEV VTVNTEESMA MARRLAKEEG
301: LLVGISSGAN VAACIKIADR EENKGKMIVT MFPSGGERYM NSDLFAPVRE ECDNMTF

Best Arabidopsis Sequence Match ( AT2G43750.1 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.