Factsheet for Os01t0978100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	mitochondrion, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0978100-01
Os03t0185000-00
Os03t0196600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59760.1	Os03t0185000-00	AT3G13110.1	11168407
AT3G59760.1	Os03t0196600-01	AT3G13110.1	11168407
AT3G59760.1	Os03t0185000-00	AT3G13110.1	12063244
AT3G59760.1	Os03t0196600-01	AT3G13110.1	12063244
AT3G59760.1	Os01t0978100-01	AT3G59760.1	11168407

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G087100.1	Wheat	plastid	83.5	84.58
TraesCS3D01G087300.1	Wheat	plastid	84.01	84.44
TraesCS3B01G102500.1	Wheat	golgi, plastid	83.76	84.18
Zm00001d040235_P005	Maize	plastid	83.76	83.33
EES02674	Sorghum	plastid	84.26	82.59
Zm00001d008379_P001	Maize	plastid	83.25	82.41
GSMUA_Achr5P17120_001	Banana	plastid	75.13	77.08
VIT_05s0094g00780.t01	Wine grape	plastid	74.37	76.7
GSMUA_Achr9P02430_001	Banana	plastid	72.33	75.0
KRH50190	Soybean	nucleus, plastid	73.86	74.81
KRH71273	Soybean	nucleus, plastid	74.62	74.62
PGSC0003DMT400059624	Potato	cytosol, plastid	73.1	74.61
Solyc08g014340.2.1	Tomato	plastid	72.84	74.35
CDY23400	Canola	plastid	71.57	72.49
Bra037682.1-P	Field mustard	plastid	71.07	71.98
CDY30438	Canola	plastid	70.81	71.72
CDY17914	Canola	plastid	70.81	71.17
AT2G43750.1	Thale cress	plastid	70.56	70.92
Bra004781.1-P	Field mustard	plastid	70.81	70.45
CDX79804	Canola	plastid	70.56	70.2
Os12t0625000-01	Rice	plasma membrane	59.14	67.15
Bra014529.1-P	Field mustard	plastid	70.05	65.4
CDY45790	Canola	plastid	70.56	65.11
AT3G59760.1	Thale cress	plastid	71.32	64.9
CDX89032	Canola	plastid	70.56	64.8
Os01t0814800-01	Rice	plastid	55.33	55.61
Os04t0165700-01	Rice	mitochondrion	51.02	53.32
Os06t0149700-00	Rice	cytosol	45.18	52.51
Os06t0564700-01	Rice	cytosol	43.15	49.71
Os06t0149900-01	Rice	cytosol	43.15	48.99
Os06t0564500-01	Rice	cytosol	42.89	47.34
Os06t0564400-00	Rice	cytosol	27.92	42.8
Os02t0222100-01	Rice	cytosol	11.93	41.96
Os03t0215800-01	Rice	plastid	28.17	24.67

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	EntrezGene:4327819	EMBL:AK065007
EMBL:AK065652	EMBL:AK099217	ProteinID:BAD87047.1	ProteinID:BAF07491.1	ProteinID:BAS76491.1	InterPro:CysK
InterPro:Cys_synth	ProteinID:EEE56113.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344
GO:GO:0030170	EnsemblPlantsGene:Os01g0978100	EnsemblPlants:Os01t0978100-01	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	UniProt:Q5JNB0	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI00004C2866	RefSeq:XP_015619253.1	SEG:seg	:

Description

Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-01);Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-02);Similar to Cysteine synthase, mitochondrial precursor (EC 2.5.1.47) (O- acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase C) (CS-C) (OAS-TL C) (AtCS-C). (Os01t0978100-03)

Coordinates

chr1:-:43232027..43238506

Molecular Weight (calculated)

41790.5 Da

IEP (calculated)

6.674

GRAVY (calculated)

0.007

Length

394 amino acids

Sequence
(BLAST)

001: MASWSSPVAA AALQVHFGSS CFFSARSPRQ TLLLPPLARN PTLTIQPRPH PFRNINSSSS SSWMCHAVAA EVEGLNIADD VTQLIGKTPM VYLNNIVKGC
101: VANVAAKLEI MEPCCSVKDR IGYSMISDAE EKGLITPGKS VLVEPTSGNT GIGLAFIAAS RGYKLILTMP ASMSMERRVL LKAFGAELVL TDAAKGMKGA
201: VDKATEILNK TPDAYMLQQF DNPANPKVHY ETTGPEIWED SKGKVDVFIG GIGTGGTISG AGRFLKEKNP GIKVIGIEPS ESNILSGGKP GPHKIQGIGA
301: GFVPRNLDSE VLDEVIEISS DEAVETAKQL ALQEGLLVGI SSGAAAAAAI KVAKRPENAG KLVVVVFPSF GERYLSSILF QSIREECEKL QPEP

Best Arabidopsis Sequence Match ( AT3G59760.1 )
(BLAST)

001: MVAMIMASRF NREAKLASQI LSTLLGNRSC YTSMAATSSS ALLLNPLTSS SSSSTLRRFR CSPEISSLSF SSASDFSLAM KRQSRSFADG SERDPSVVCE
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VVFPSFGERY LSTPLFQSIR EEVEKMQPER VSG

Arabidopsis Description

OASCCysteine synthase [Source:UniProtKB/TrEMBL;Acc:B9DFR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.