Factsheet for Os06t0149900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G072450.2	Barley	cytosol	24.21	91.3
HORVU7Hr1G021860.7	Barley	cytosol	85.59	85.34
TraesCS4A01G401700.1	Wheat	cytosol	85.3	85.3
TraesCS4A01G401600.1	Wheat	cytosol	85.3	85.06
TraesCS7D01G096800.1	Wheat	cytoskeleton, cytosol, plastid	84.73	84.73
KXG19309	Sorghum	cytosol	84.44	84.68
TraesCS7A01G102700.1	Wheat	cytosol	84.73	84.48
TraesCS7A01G102800.1	Wheat	cytosol	84.44	84.44
Zm00001d045327_P001	Maize	cytosol, extracellular	83.0	83.24
KXG19308	Sorghum	cytosol	82.42	81.95
Zm00001d045340_P004	Maize	cytosol	80.98	79.38
Os06t0149700-00	Rice	cytosol	74.06	75.81
TraesCS7D01G096700.1	Wheat	mitochondrion	85.01	74.49
OQU75833	Sorghum	cytosol	52.45	74.29
GSMUA_Achr2P16640_001	Banana	cytosol	72.33	73.82
HORVU7Hr1G021840.21	Barley	plastid	78.67	72.61
Os06t0564700-01	Rice	cytosol	68.01	69.01
Os02t0222100-01	Rice	cytosol	22.19	68.75
Os06t0564500-01	Rice	cytosol	69.45	67.51
OQU75837	Sorghum	cytosol	47.26	61.89
Os06t0564400-00	Rice	cytosol	45.82	61.87
Os12t0625000-01	Rice	plasma membrane	49.86	49.86
Os04t0165700-01	Rice	mitochondrion	49.28	45.36
Os01t0978100-01	Rice	plastid	48.99	43.15
Os01t0814800-01	Rice	plastid	45.53	40.31
Os03t0215800-01	Rice	plastid	27.67	21.33

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	EntrezGene:4340142	MapMan:50.2.5	EMBL:AK072457
ProteinID:BAD69043.1	ProteinID:BAF18734.1	ProteinID:BAS96178.1	InterPro:CysK	InterPro:Cys_synth	ProteinID:EEE65093.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:Os06g0149900	EnsemblPlants:Os06t0149900-01	PFAM:PF00291
InterPro:PLP-dep	PANTHER:PTHR10314	PANTHER:PTHR10314:SF114	UniProt:Q5VND2	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000045802E	RefSeq:XP_015642974.1	SEG:seg	:

Description

Similar to Cysteine synthase (EC 4.2.99.8). (Os06t0149900-01)

Coordinates

chr6:+:2579089..2581720

Molecular Weight (calculated)

37048.0 Da

IEP (calculated)

5.130

GRAVY (calculated)

-0.037

Length

347 amino acids

Sequence
(BLAST)

001: MEGEGIGRRG LPSLLGSSSS ESGGIGQEHI ASDITQLIGW TPLVELKRIA SKDGIDARIV GKVEAYQPLC SVKDRSALRM IEDAEEKGLI TPGVTTLVEP
101: TSGNLGLGLV LVALRKGYRF VAVMPGQYSF DKQILLKYMG AELFLSDPTL GFQGLVDKVE QLKKELPNVH VLNQFSNPAN QEAHMRLTGP EIWKDTAGKV
201: DIFVTGSGSG GTVSGVGKYL KLQNPAVKII CVEPAESPVI SGGEPGKHKI QGIGPGLIPD MLDTSVIDEV VTVNTDEAMV NARRLAMEEG LLMGISSGAN
301: LAACLKVASR EENKGKMIVT MFPSGGERYM NSDLFAAVRE ECNAMTF

Best Arabidopsis Sequence Match ( AT3G04940.1 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.