CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G072450.2	Barley	cytosol	23.67	63.04
KXG19309	Sorghum	cytosol	82.04	58.09
Zm00001d045327_P001	Maize	cytosol, extracellular	78.78	55.78
HORVU7Hr1G021860.7	Barley	cytosol	77.14	54.31
TraesCS7D01G096800.1	Wheat	cytoskeleton, cytosol, plastid	76.73	54.18
TraesCS7A01G102700.1	Wheat	cytosol	76.73	54.02
TraesCS4A01G401700.1	Wheat	cytosol	75.92	53.6
KXG19308	Sorghum	cytosol	76.33	53.58
TraesCS4A01G401600.1	Wheat	cytosol	75.92	53.45
TraesCS7A01G102800.1	Wheat	cytosol	75.51	53.31
Os06t0149900-01	Rice	cytosol	74.29	52.45
KXG19307	Sorghum	cytosol	71.02	49.57
TraesCS7D01G096700.1	Wheat	mitochondrion	77.55	47.98
GSMUA_Achr2P16640_001	Banana	cytosol	63.27	45.59
EES04772	Sorghum	cytosol	61.22	43.99
HORVU7Hr1G021840.21	Barley	plastid	66.94	43.62
OQU75837	Sorghum	cytosol	42.04	38.87
KXG24064	Sorghum	cytosol	44.49	33.54
KXG26295	Sorghum	cytosol	46.94	32.86
EES11801	Sorghum	mitochondrion	46.53	29.53
EES02674	Sorghum	plastid	46.12	28.11
EES03791	Sorghum	plastid	42.45	27.08
EER95270	Sorghum	plastid	28.57	15.42

Protein Annotations

EnsemblPlants:OQU75833	EnsemblPlantsGene:SORBI_3010G039401	Gene3D:3.40.50.1100	InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314
PANTHER:PTHR10314:SF129	PFAM:PF00291	ProteinID:OQU75833	ProteinID:OQU75833.1	SEG:seg	SUPFAM:SSF53686
UniParc:UPI0009DC886D	UniProt:A0A1W0VRD2	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3111834..3117754

Molecular Weight (calculated)

26430.0 Da

IEP (calculated)

5.155

GRAVY (calculated)

-0.084

Length

245 amino acids

Sequence
(BLAST)

001: MAGEEAGRMG IPSLLYPSYA CSSEEQQEHI VSDVTQLIGW TPLIELKGIA SKERVDARII GKIEAYQPLC SVKDRCALRM IEDAEERGLI SPGVTTLVEP
101: TGGNMGLGLV LIAIRKGYMF VAVMSGQYSL DKQILLRYMG AELYLTGPEI WKDTAGKVDI FVAGSGTGGT VSGVGKYLKM QNPSIKIICV EPAESPFRNT
201: NYHQLDGEPG KHKIQGIGPG FVPEVLDRSV SHEVVTVTTG GDGER

Best Arabidopsis Sequence Match ( AT3G59760.1 )
(BLAST)

001: MVAMIMASRF NREAKLASQI LSTLLGNRSC YTSMAATSSS ALLLNPLTSS SSSSTLRRFR CSPEISSLSF SSASDFSLAM KRQSRSFADG SERDPSVVCE
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VVFPSFGERY LSTPLFQSIR EEVEKMQPER VSG

Arabidopsis Description

OASCCysteine synthase [Source:UniProtKB/TrEMBL;Acc:B9DFR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.