CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU85910

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	OQU85910	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031136_P003	Maize	plasma membrane	98.77	98.77
HORVU3Hr1G040910.1	Barley	mitochondrion	9.54	91.18
TraesCS5D01G027600.1	Wheat	cytosol, golgi	91.08	91.08
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	85.54	85.54
PGSC0003DMT400082113	Potato	cytosol	84.31	84.31
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	84.0	84.0
Os12t0625000-01	Rice	plasma membrane	89.54	83.86
KRH27640	Soybean	cytosol	83.69	83.69
KRH68699	Soybean	cytosol	83.08	83.08
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	82.77	82.77
CDY68436	Canola	cytosol	81.85	82.61
Bra039708.1-P	Field mustard	cytosol	81.85	82.61
AT4G14880.5	Thale cress	cytosol	80.92	81.68
CDY42795	Canola	cytosol	80.92	81.68
CDY29778	Canola	cytosol, peroxisome, plastid	76.0	81.52
Bra036910.1-P	Field mustard	plastid	79.69	81.19
CDY09039	Canola	cytosol	77.54	80.77
KRH77854	Soybean	cytosol	18.15	79.73
AT3G22460.1	Thale cress	cytosol	61.23	79.6
KRG91325	Soybean	cytosol, mitochondrion, nucleus	79.38	79.38
VIT_14s0030g01520.t01	Wine grape	cytosol	74.46	74.92
KRH35519	Soybean	cytosol	70.15	74.75
HORVU5Hr1G015070.1	Barley	extracellular	15.38	73.53
KRH13764	Soybean	cytosol	72.31	73.21
KRG92757	Soybean	cytosol	71.38	71.83
VIT_14s0030g01550.t01	Wine grape	cytosol	74.77	71.05
KRH34052	Soybean	cytosol	70.46	70.68
KRH34037	Soybean	cytosol	69.54	69.97
AT5G28020.1	Thale cress	cytosol	68.62	69.04
TraesCS5A01G022200.1	Wheat	plastid	90.77	68.93
CDY69239	Canola	cytosol	67.38	68.22
CDY41911	Canola	cytosol	67.38	68.22
CDY50768	Canola	cytosol	67.08	67.91
KXG26295	Sorghum	cytosol	72.92	67.71
CDY52498	Canola	cytosol	67.08	67.49
Bra036115.1-P	Field mustard	cytosol	67.08	67.49
KRH43690	Soybean	cytosol	48.31	67.38
CDX74160	Canola	cytosol	66.46	67.29
AT3G04940.1	Thale cress	cytosol	67.08	67.28
TraesCS5B01G018700.3	Wheat	plastid	90.77	67.2
CDY00007	Canola	cytosol	66.77	67.18
HORVU5Hr1G005980.2	Barley	plastid	90.15	67.05
CDY05586	Canola	cytosol	66.46	66.87
Bra009985.1-P	Field mustard	cytosol	56.92	66.79
CDX86187	Canola	cytosol	62.46	66.78
AT5G28030.2	Thale cress	cytosol	66.15	66.56
Solyc01g097950.2.1	Tomato	cytosol	66.15	66.56
CDY19703	Canola	cytosol	66.15	66.56
CDY41913	Canola	cytosol	61.54	65.79
CDX80680	Canola	cytosol	61.54	65.79
Solyc01g097940.1.1	Tomato	plasma membrane	39.08	64.8
Solyc01g097930.2.1	Tomato	cytosol	64.31	64.71
Solyc01g097920.2.1	Tomato	cytosol, plastid	70.77	64.61
CDY00008	Canola	mitochondrion	67.08	62.11
CDY19702	Canola	mitochondrion	67.08	62.11
Bra036114.1-P	Field mustard	cytosol	64.31	61.11
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	35.08	60.96
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	71.69	59.74
EES02674	Sorghum	plastid	72.62	58.71
KRG92761	Soybean	cytosol	57.85	56.8
Bra001131.1-P	Field mustard	mitochondrion	67.38	54.75
VIT_14s0030g01490.t01	Wine grape	cytosol	73.85	54.67
CDY41915	Canola	cytosol	10.15	53.23
EES11801	Sorghum	mitochondrion	61.85	52.07
EES03791	Sorghum	plastid	60.92	51.56
Bra020605.1-P	Field mustard	mitochondrion	66.15	49.54
KXG19308	Sorghum	cytosol	52.62	49.0
KXG19309	Sorghum	cytosol	52.0	48.84
EES04772	Sorghum	cytosol	51.08	48.68
KXG19307	Sorghum	cytosol	52.0	48.15
Bra040417.1-P	Field mustard	cytosol	43.38	45.19
OQU75833	Sorghum	cytosol	33.54	44.49
OQU75837	Sorghum	cytosol	36.0	44.15
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	85.23	39.52
HORVU1Hr1G031220.3	Barley	plastid	47.69	38.08
EER95270	Sorghum	plastid	35.38	25.33

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	UniProt:A0A1B6PEF6	InterPro:CysK
InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344
EnsemblPlants:KXG24064	ProteinID:KXG24064	ProteinID:KXG24064.1	ProteinID:KXG24066.1	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	MetaCyc:PWY-6936	EnsemblPlantsGene:SORBI_3008G179900
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0001C807BF	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:61322416..61327107

Molecular Weight (calculated)

34189.6 Da

IEP (calculated)

5.522

GRAVY (calculated)

0.081

Length

325 amino acids

Sequence
(BLAST)

001: MGEASPSIAK DVTELIGNTP LVYLNKVTDG CVGRVAAKLE SMEPCSSVKD RIGYSMITDA EEKGLIIPGV SVLIEPTSGN TGIGLAFMAA AKGYKLILTM
101: PASMSMERRI ILKAFGAELV LTDPLLGMKG AVKKAEEIQA KTPNSYILQQ FENPANPKIH YETTGPEIWK ATAGKIDALV SGIGTGGTIT GTGRYLREQN
201: PNVKLYGVEP VESAVLNGGK PGPHKIQGIG AGFIPGVLDV DLLDETLQVS SDEAIETAKS LALKEGLLVG ISSGAAAAAA VRLAKRPENA GKLFVVVFPS
301: FGERYLSSVL FQSIKKEAES MVVEP

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.