CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29778	Canola	cytosol, peroxisome, plastid	93.79	99.67
Bra036910.1-P	Field mustard	plastid	98.45	99.37
CDY68436	Canola	cytosol	97.83	97.83
CDY09039	Canola	cytosol	93.48	96.47
AT4G14880.5	Thale cress	cytosol	95.65	95.65
PGSC0003DMT400082113	Potato	cytosol	85.71	84.92
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	85.4	84.62
KRH27640	Soybean	cytosol	84.47	83.69
Zm00001d031136_P003	Maize	plasma membrane	81.68	80.92
TraesCS5D01G027600.1	Wheat	cytosol, golgi	81.68	80.92
KXG24064	Sorghum	cytosol	81.68	80.92
KRG91325	Soybean	cytosol, mitochondrion, nucleus	80.75	80.0
GSMUA_Achr4P21350_001	Banana	cytosol	79.81	79.08
GSMUA_Achr9P25760_001	Banana	cytosol	79.19	78.7
GSMUA_Achr11P...	Banana	cytosol	79.19	78.7
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	78.57	77.85
KRH77854	Soybean	cytosol	17.7	77.03
HORVU3Hr1G040910.1	Barley	mitochondrion	8.07	76.47
KRH35519	Soybean	cytosol	69.88	73.77
Os12t0625000-01	Rice	plasma membrane	79.19	73.49
CDY41911	Canola	cytosol	68.63	68.85
CDY50768	Canola	cytosol	68.32	68.54
CDY69239	Canola	cytosol	68.32	68.54
TraesCS2B01G316800.1	Wheat	cytosol	69.57	68.5
CDX74160	Canola	cytosol	67.39	67.6
TraesCS2A01G300600.1	Wheat	cytosol	68.63	67.58
HORVU2Hr1G074630.2	Barley	cytosol	60.56	67.24
CDX86187	Canola	cytosol	63.04	66.78
CDY52498	Canola	cytosol	66.46	66.25
CDX80680	Canola	cytosol	62.11	65.79
CDY41913	Canola	cytosol	62.11	65.79
CDY05586	Canola	cytosol	65.84	65.63
CDY00007	Canola	cytosol	65.53	65.33
CDY19703	Canola	cytosol	64.91	64.71
HORVU5Hr1G015070.1	Barley	extracellular	13.35	63.24
TraesCS2D01G298600.2	Wheat	cytosol	69.57	62.57
KXG26295	Sorghum	cytosol	67.7	62.29
Zm00001d003717_P001	Maize	cytosol	67.39	61.65
TraesCS5A01G022200.1	Wheat	plastid	81.37	61.22
HORVU5Hr1G005980.2	Barley	plastid	81.68	60.18
CDY00008	Canola	mitochondrion	65.22	59.83
TraesCS5B01G018700.3	Wheat	plastid	81.37	59.68
CDY19702	Canola	mitochondrion	64.91	59.54
CDY30438	Canola	plastid	71.74	59.38
CDY23400	Canola	plastid	71.43	59.13
CDY17914	Canola	plastid	71.43	58.67
CDX79804	Canola	plastid	71.43	58.08
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	32.61	56.15
CDY45790	Canola	plastid	71.43	53.86
CDX89032	Canola	plastid	71.43	53.61
CDX89116	Canola	mitochondrion	60.25	52.72
CDX71737	Canola	mitochondrion	59.94	52.45
CDY43932	Canola	mitochondrion	59.94	52.45
CDY48919	Canola	endoplasmic reticulum	50.62	51.75
CDY29946	Canola	plastid	61.49	50.51
CDY21176	Canola	plastid	61.18	50.13
CDY41915	Canola	cytosol	8.7	45.16
HORVU1Hr1G031220.3	Barley	plastid	44.1	34.89
CDY68838	Canola	mitochondrion	14.6	34.56
CDY52906	Canola	plastid	32.3	24.07
CDY53756	Canola	endoplasmic reticulum	32.61	23.97

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	GO:A0A078HWD7	UniProt:A0A078HWD7
EnsemblPlants:CDY42795	ProteinID:CDY42795	ProteinID:CDY42795.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00075360001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF160	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EBD9A6
SEG:seg	:	:	:	:	:

Description

BnaC01g22710DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078HWD7]

Coordinates

chrLK032534:-:199150..201699

Molecular Weight (calculated)

33853.2 Da

IEP (calculated)

5.521

GRAVY (calculated)

0.102

Length

322 amino acids

Sequence
(BLAST)

001: MASCIANDVT ELIGNTPLVY LNSVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSVERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTD GKIDGFVSGI GTGGTITGAG KYLKEQNPNV
201: KLYGVEPIES AILSGGKPGP HKIQGIGAGF IPSVLEVNLI DEVVQVSSDE SIDMARLLAR KEGLLVGISS GAAAAAAIKL AKRPENAGKL FVAVFPSFGE
301: RYLSTVLFDA TRKEAESMTF EA

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.