CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038025.1-P	Field mustard	plastid	99.54	99.54
CDY53756	Canola	endoplasmic reticulum	94.68	93.38
AT1G55880.1	Thale cress	endoplasmic reticulum	86.11	88.36
VIT_19s0015g00380.t01	Wine grape	plastid	74.31	76.25
KRH14231	Soybean	mitochondrion	73.38	74.59
PGSC0003DMT400057393	Potato	plastid	72.45	74.52
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	72.45	74.35
GSMUA_Achr3P26040_001	Banana	endoplasmic reticulum	69.68	69.68
TraesCS4D01G244300.1	Wheat	plastid	70.37	68.93
TraesCS4B01G245100.1	Wheat	plastid	70.37	68.93
TraesCS4A01G079100.1	Wheat	plastid	69.68	68.56
Os03t0215800-01	Rice	plastid	70.14	67.33
EER95270	Sorghum	plastid	70.37	66.96
KRH73904	Soybean	cytosol	63.89	65.4
HORVU4Hr1G067610.1	Barley	plastid	69.91	64.12
Zm00001d028220_P001	Maize	plastid	69.91	61.63
CDY19703	Canola	cytosol	24.54	32.82
CDY00007	Canola	cytosol	24.54	32.82
CDY69239	Canola	cytosol	24.07	32.4
CDY41911	Canola	cytosol	24.07	32.4
CDY68436	Canola	cytosol	24.07	32.3
CDY42795	Canola	cytosol	24.07	32.3
CDY52498	Canola	cytosol	24.07	32.2
CDX74160	Canola	cytosol	23.84	32.09
CDY50768	Canola	cytosol	23.84	32.09
CDY05586	Canola	cytosol	23.84	31.89
CDY41913	Canola	cytosol	21.76	30.92
CDX80680	Canola	cytosol	21.76	30.92
CDY09039	Canola	cytosol	22.22	30.77
CDY29778	Canola	cytosol, peroxisome, plastid	21.53	30.69
CDX86187	Canola	cytosol	21.53	30.59
CDY00008	Canola	mitochondrion	23.84	29.34
CDY19702	Canola	mitochondrion	23.84	29.34
CDY43932	Canola	mitochondrion	23.38	27.45
CDX89116	Canola	mitochondrion	23.15	27.17
CDX71737	Canola	mitochondrion	23.15	27.17
CDY30438	Canola	plastid	23.84	26.48
CDY23400	Canola	plastid	23.84	26.48
CDY17914	Canola	plastid	23.15	25.51
CDY21176	Canola	plastid	23.15	25.45
CDY29946	Canola	plastid	22.92	25.26
CDX79804	Canola	plastid	23.15	25.25
CDY45790	Canola	plastid	24.54	24.82
CDY48919	Canola	endoplasmic reticulum	18.06	24.76
CDX89032	Canola	plastid	24.54	24.71
CDY41915	Canola	cytosol	3.24	22.58
CDY68838	Canola	mitochondrion	6.48	20.59

Protein Annotations

MapMan:35.1	GO:A0A078ISV7	UniProt:A0A078ISV7	EnsemblPlants:CDY52906	ProteinID:CDY52906	ProteinID:CDY52906.1
GO:GO:0005575	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00008080001	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF35	SUPFAM:SSF53686	TMHMM:TMhelix	InterPro:Trypto_synt_PLP_dependent
UniParc:UPI0004EE2C89	SEG:seg	:	:	:	:

Description

BnaA06g00120DBnaA06g00120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISV7]

Coordinates

chrLK033141:-:26903..29227

Molecular Weight (calculated)

46163.3 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.069

Length

432 amino acids

Sequence
(BLAST)

001: MAPVKITGAV VAAAATMVML SYCFFRFSSD KLDSCSSSSS SKKKKKLSTR NGLVDAIGNT PLIRINSLSD ATGSEILGKC EFLNPGGSVK DRVAVKIIEE
101: ALESGLLFPG GIVTEGSAGS TAISLATVAP AYGCQCHVVI PDDAAIEKSQ IIEALGATVE RVRPVSITHK DHFVNIARRR ADQANDLASS SKTRLASRIN
201: VAHQEKTNGC TAEEQKVPSL FSESVTGGFF ADQFENLANY RAHYEGTGPE IWQQTHGNID AFVAAAGTGG TLAGVSRFLQ EKNEKVKCFL IDPPGSGLFN
301: KVTRGVMYTR EEAEGRRLKN PFDTITEGIG INRLTQNFLM AKIDGGFRGT DKEAVEMSRF LLKKDGLFVG SSSAMNCVGA VRVAQALGPG HTIVTILCDS
401: GMRHLSKFHD PQYLALYGLT PTAVGLEFLG IK

Best Arabidopsis Sequence Match ( AT1G55880.1 )
(BLAST)

001: MAPVNMTGAV VAAAALLMLT SYSFFFRLSE KKKRKEKLTM RNGLVDAIGN TPLIRINSLS EATGCEILGK CEFLNPGGSV KDRVAVKIIQ EALESGKLFP
101: GGIVTEGSAG STAISLATVA PAYGCKCHVV IPDDAAIEKS QIIEALGASV ERVRPVSITH KDHYVNIARR RADEANELAS KRRLGSETNG IHQEKTNGCT
201: VEEVKEPSLF SDSVTGGFFA DQFENLANYR AHYEGTGPEI WHQTQGNIDA FVAAAGTGGT LAGVSRFLQD KNERVKCFLI DPPGSGLYNK VTRGVMYTRE
301: EAEGRRLKNP FDTITEGIGI NRLTKNFLMA KLDGGFRGTD KEAVEMSRFL LKNDGLFVGS SSAMNCVGAV RVAQTLGPGH TIVTILCDSG MRHLSKFHDP
401: KYLNLYGLSP TAIGLEFLGI K

Arabidopsis Description

At1g55880 [Source:UniProtKB/TrEMBL;Acc:Q6NKY5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.