CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034224	Potato	cytosol	18.1	78.08
KRH74905	Soybean	cytosol	19.68	77.5
Bra007604.1-P	Field mustard	mitochondrion	84.76	72.55
CDX71737	Canola	mitochondrion	84.13	72.01
CDX89116	Canola	mitochondrion	83.17	71.2
CDY43932	Canola	mitochondrion	82.86	70.92
PGSC0003DMT400021594	Potato	cytosol	22.54	70.3
PGSC0003DMT400040030	Potato	cytosol	23.81	70.09
AT3G61440.1	Thale cress	mitochondrion	81.27	69.57
PGSC0003DMT400012263	Potato	cytosol	23.49	69.16
HORVU7Hr1G023500.1	Barley	cytosol	22.54	66.98
PGSC0003DMT400000156	Potato	mitochondrion	73.65	66.86
Solyc10g012370.2.1	Tomato	mitochondrion	73.33	65.81
PGSC0003DMT400016646	Potato	mitochondrion	72.7	65.24
Solyc01g094790.2.1	Tomato	plastid	73.33	64.71
PGSC0003DMT400064098	Potato	cytosol	15.87	64.1
Solyc04g058120.1.1	Tomato	mitochondrion	18.1	62.64
VIT_15s0046g02300.t01	Wine grape	mitochondrion	73.33	62.26
KRH00797	Soybean	mitochondrion	73.33	62.1
KRH40428	Soybean	mitochondrion	73.33	61.93
GSMUA_Achr5P19480_001	Banana	mitochondrion	69.52	61.0
VIT_04s0044g00250.t01	Wine grape	mitochondrion	68.57	60.17
Zm00001d004413_P002	Maize	mitochondrion	68.89	56.81
Os04t0165700-01	Rice	mitochondrion	67.62	56.5
EES11801	Sorghum	mitochondrion	69.21	56.48
TraesCS5B01G300800.1	Wheat	mitochondrion	67.62	56.35
TraesCS5A01G300400.1	Wheat	mitochondrion	67.62	56.05
CDY68436	Canola	cytosol	52.38	51.24
CDY42795	Canola	cytosol	51.75	50.62
CDY29778	Canola	cytosol, peroxisome, plastid	48.25	50.16
CDY09039	Canola	cytosol	49.52	50.0
CDY69239	Canola	cytosol	47.94	47.04
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	67.62	46.71
CDX74160	Canola	cytosol	47.3	46.42
CDY41911	Canola	cytosol	47.3	46.42
CDY50768	Canola	cytosol	47.3	46.42
CDY41913	Canola	cytosol	44.76	46.38
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	19.05	45.45
CDY52498	Canola	cytosol	45.4	44.27
CDY05586	Canola	cytosol	45.4	44.27
CDX86187	Canola	cytosol	42.54	44.08
CDY00007	Canola	cytosol	45.08	43.96
CDY19703	Canola	cytosol	44.76	43.65
CDX80680	Canola	cytosol	41.59	43.09
CDY19702	Canola	mitochondrion	46.98	42.17
CDY00008	Canola	mitochondrion	46.98	42.17
CDY17914	Canola	plastid	51.43	41.33
CDY23400	Canola	plastid	50.79	41.13
CDY30438	Canola	plastid	50.79	41.13
CDX79804	Canola	plastid	51.43	40.91
CDX89032	Canola	plastid	53.33	39.16
CDY45790	Canola	plastid	52.7	38.88
CDY41915	Canola	cytosol	7.62	38.71
CDY21176	Canola	plastid	45.71	36.64
CDY29946	Canola	plastid	45.4	36.48
CDY52906	Canola	plastid	24.76	18.06
CDY53756	Canola	endoplasmic reticulum	24.76	17.81
CDY68838	Canola	mitochondrion	4.13	9.56

Protein Annotations

KEGG:00460+4.4.1.9	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078IHN8	UniProt:A0A078IHN8	InterPro:CAS
EnsemblPlants:CDY48919	ProteinID:CDY48919	ProteinID:CDY48919.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0019344	GO:GO:0019499	GO:GO:0050017	EnsemblPlantsGene:GSBRNA2T00092006001	PFAM:PF00291	InterPro:PLP-dep
PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	TMHMM:TMhelix	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0004EDE80B
SEG:seg	:	:	:	:	:

Description

BnaA09g39180DBnaA09g39180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHN8]

Coordinates

chrLK032801:-:46668..48917

Molecular Weight (calculated)

34128.4 Da

IEP (calculated)

5.011

GRAVY (calculated)

0.151

Length

315 amino acids

Sequence
(BLAST)

001: MTISAYVVFT TISAYVVFMT ISAYVELTSI LFKSFYVVFT TISAYVELTS HIDVYVYQTT LIEPTSGNMG ISMAFMAALK GYKIIMTMPS YTSLERRVTM
101: RSFGAELVLT DPTKGMGGTV KKAYDLLEST PDAHMLQQFA NPANTQIHYD TTGPEIWEDT LGNVDIFVMG IGSGGTVSGV GQYLKSKNPN VKIYGVEPAE
201: SNILNGGKPG PHAITGNGVG FKPDILDMDV MESVLEVSSE DAIKMARELA LKEGLMVGIS SGANTVAAIK LAKMPENKGK LIVTIHASFG ERYLSSILFD
301: ELRKEAEAMK PVSVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.