Factsheet for PGSC0003DMT400000156

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094790.2.1	Tomato	plastid	98.85	96.08
PGSC0003DMT400034224	Potato	cytosol	18.44	87.67
PGSC0003DMT400016646	Potato	mitochondrion	85.01	84.05
VIT_15s0046g02300.t01	Wine grape	mitochondrion	87.32	81.67
PGSC0003DMT400021594	Potato	cytosol	23.34	80.2
VIT_04s0044g00250.t01	Wine grape	mitochondrion	82.71	79.94
PGSC0003DMT400064098	Potato	cytosol	17.87	79.49
KRH40428	Soybean	mitochondrion	85.3	79.36
KRH00797	Soybean	mitochondrion	85.01	79.3
KRH74905	Soybean	cytosol	18.16	78.75
PGSC0003DMT400040030	Potato	cytosol	23.92	77.57
PGSC0003DMT400012263	Potato	cytosol	23.92	77.57
Bra014436.1-P	Field mustard	mitochondrion	79.83	75.27
CDX71737	Canola	mitochondrion	79.83	75.27
CDX89116	Canola	mitochondrion	79.83	75.27
Bra007604.1-P	Field mustard	mitochondrion	79.54	75.0
CDY43932	Canola	mitochondrion	79.54	75.0
AT3G61440.1	Thale cress	mitochondrion	79.54	75.0
CDY48919	Canola	endoplasmic reticulum	66.86	73.65
GSMUA_Achr5P19480_001	Banana	mitochondrion	75.22	72.7
Os04t0165700-01	Rice	mitochondrion	74.06	68.17
EES11801	Sorghum	mitochondrion	74.93	67.36
Zm00001d004413_P002	Maize	mitochondrion	74.06	67.28
HORVU7Hr1G023500.1	Barley	cytosol	20.46	66.98
TraesCS5B01G300800.1	Wheat	mitochondrion	72.91	66.93
TraesCS5A01G300400.1	Wheat	mitochondrion	72.33	66.05
PGSC0003DMT400082113	Potato	cytosol	54.47	58.15
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	72.33	55.04
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	20.46	53.79
PGSC0003DMT400059624	Potato	cytosol, plastid	56.48	50.78
CDY68838	Canola	mitochondrion	15.27	38.97
PGSC0003DMT400057393	Potato	plastid	29.39	24.29

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	EMBL:AB029338
ProteinID:BAB20032	ProteinID:BAB20032.1	InterPro:CAS	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0016829	GO:GO:0019344	GO:GO:0019499	GO:GO:0050017
UniProt:M0ZG73	InterPro:P-phosphate_BS	PFAM:PF00291	EnsemblPlantsGene:PGSC0003DMG400000048	PGSC:PGSC0003DMG400000048	EnsemblPlants:PGSC0003DMT400000156
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	TIGRFAMs:TIGR01136
TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000294B42B	SEG:seg	:	:

Description

Cysteine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400000048]

Coordinates

chr1:+:72319343..72322034

Molecular Weight (calculated)

37727.0 Da

IEP (calculated)

8.821

GRAVY (calculated)

-0.173

Length

347 amino acids

Sequence
(BLAST)

001: MATLSRFLKK RSLASNRLFS TQLPHTNIKS EVSQLIGKTP MVYLKKVTEG CGAYIAVKQE MFQPTSSIKD RPALAMINDA EKKGLISPEK TTLIEPTSGN
101: MGISMAFMAA MKGYKMVLTM PSYTSMERRV TMRAFGADLI LTDPTKGMGG TVKKAYELLE STPNAFMLQQ FSNPANTQVH FDTTGPEIWE ETLGNVDIFV
201: MGIGSGGTVT GVGQYLKSKN PNVKIYGLEP TESNILNGGK PGPHHITGNG VGFKPDILDM DLMEEVLMVS SEDAVNMARE LAVKEGLMVG ISSGANTVAA
301: LRLAQKPENK GKLIVTVHAS FGERYLSSVL YQDLRKEAEN MQPVSVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.