CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007604.1-P	Field mustard	mitochondrion	50.0	18.48
CDX71737	Canola	mitochondrion	50.0	18.48
CDX89116	Canola	mitochondrion	49.26	18.21
CDY43932	Canola	mitochondrion	48.53	17.93
VIT_04s0044g00250.t01	Wine grape	mitochondrion	43.38	16.43
KRH00797	Soybean	mitochondrion	44.12	16.13
KRH40428	Soybean	mitochondrion	44.12	16.09
AT3G61440.1	Thale cress	mitochondrion	43.38	16.03
VIT_15s0046g02300.t01	Wine grape	mitochondrion	42.65	15.63
PGSC0003DMT400000156	Potato	mitochondrion	38.97	15.27
Solyc10g012370.2.1	Tomato	mitochondrion	38.97	15.1
PGSC0003DMT400016646	Potato	mitochondrion	38.97	15.1
CDY09039	Canola	cytosol	34.56	15.06
GSMUA_Achr5P19480_001	Banana	mitochondrion	39.71	15.04
CDY52498	Canola	cytosol	35.29	14.86
CDY19703	Canola	cytosol	35.29	14.86
CDY00007	Canola	cytosol	35.29	14.86
CDY29778	Canola	cytosol, peroxisome, plastid	33.09	14.85
Solyc01g094790.2.1	Tomato	plastid	38.97	14.85
CDY41911	Canola	cytosol	34.56	14.64
CDY69239	Canola	cytosol	34.56	14.64
CDY50768	Canola	cytosol	34.56	14.64
CDY68436	Canola	cytosol	34.56	14.6
CDY42795	Canola	cytosol	34.56	14.6
CDY05586	Canola	cytosol	34.56	14.55
CDX74160	Canola	cytosol	33.82	14.33
CDX86187	Canola	cytosol	31.62	14.14
CDX80680	Canola	cytosol	31.62	14.14
Os04t0165700-01	Rice	mitochondrion	38.97	14.06
TraesCS5A01G300400.1	Wheat	mitochondrion	38.97	13.95
TraesCS5B01G300800.1	Wheat	mitochondrion	38.24	13.76
EES11801	Sorghum	mitochondrion	38.24	13.47
Zm00001d004413_P002	Maize	mitochondrion	37.5	13.35
CDY19702	Canola	mitochondrion	33.09	12.82
CDY00008	Canola	mitochondrion	33.09	12.82
CDY41913	Canola	cytosol	27.21	12.17
CDY29946	Canola	plastid	34.56	11.99
CDY21176	Canola	plastid	34.56	11.96
CDY45790	Canola	plastid	36.76	11.71
CDX79804	Canola	plastid	33.82	11.62
CDY23400	Canola	plastid	33.09	11.57
CDY30438	Canola	plastid	33.09	11.57
CDY17914	Canola	plastid	33.09	11.48
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	38.24	11.4
CDX89032	Canola	plastid	35.29	11.19
CDY53756	Canola	endoplasmic reticulum	21.32	6.62
CDY52906	Canola	plastid	20.59	6.48
CDY48919	Canola	endoplasmic reticulum	9.56	4.13
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	3.68	3.79
KRH74905	Soybean	cytosol	2.21	3.75
PGSC0003DMT400021594	Potato	cytosol	2.21	2.97
PGSC0003DMT400064098	Potato	cytosol	1.47	2.56
Solyc04g058120.1.1	Tomato	mitochondrion	1.47	2.2
HORVU7Hr1G023500.1	Barley	cytosol	1.47	1.89
PGSC0003DMT400034224	Potato	cytosol	0.0	0.0
PGSC0003DMT400040030	Potato	cytosol	0.0	0.0
PGSC0003DMT400012263	Potato	cytosol	0.0	0.0
CDY41915	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00460+4.4.1.9	Gene3D:3.40.50.1100	MapMan:35.1	GO:A0A078JMV8	UniProt:A0A078JMV8	InterPro:CAS
EnsemblPlants:CDY68838	ProteinID:CDY68838	ProteinID:CDY68838.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019499
GO:GO:0050017	EnsemblPlantsGene:GSBRNA2T00080405001	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0004EE0117	:

Description

BnaAnng28500DBnaAnng28500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMV8]

Coordinates

chrLK038102:+:3796..4546

Molecular Weight (calculated)

15512.9 Da

IEP (calculated)

10.917

GRAVY (calculated)

-0.147

Length

136 amino acids

Sequence
(BLAST)

001: MASVWRRLLK TETIPRISQS TRKLFSTDGS SSFAERLRNL PKEFPATQAK RDASLLIGRT PLVFLNRVTE GCGAYIAAKQ EHFQPTCSVK DRPALAMVAD
101: AEKKNLITPG KVILFLFTYF IRYRFNVNHS VWFPFA

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.