CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69239	Canola	cytosol	88.16	83.49
CDX74160	Canola	cytosol	87.83	83.18
AT3G04940.1	Thale cress	cytosol	82.24	77.16
CDY50768	Canola	cytosol	79.61	75.39
CDY41911	Canola	cytosol	78.95	74.77
CDY52498	Canola	cytosol	78.29	73.68
CDY05586	Canola	cytosol	77.63	73.06
CDY00007	Canola	cytosol	76.97	72.45
CDY19703	Canola	cytosol	76.32	71.83
CDX80680	Canola	cytosol	70.39	70.39
CDX86187	Canola	cytosol	70.39	70.39
KRH13764	Soybean	cytosol	70.72	66.98
CDY19702	Canola	mitochondrion	76.97	66.67
CDY00008	Canola	mitochondrion	76.64	66.38
CDY41915	Canola	cytosol	13.49	66.13
VIT_14s0030g01520.t01	Wine grape	cytosol	69.41	65.33
KRH34052	Soybean	cytosol	69.08	64.81
KRG92757	Soybean	cytosol	68.75	64.71
KRH34037	Soybean	cytosol	68.09	64.09
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	68.42	64.0
GSMUA_Achr9P25760_001	Banana	cytosol	67.76	63.58
GSMUA_Achr11P...	Banana	cytosol	67.11	62.96
GSMUA_Achr4P21350_001	Banana	cytosol	66.78	62.46
CDY68436	Canola	cytosol	66.12	62.42
CDY42795	Canola	cytosol	65.79	62.11
CDY29778	Canola	cytosol, peroxisome, plastid	61.84	62.05
TraesCS5D01G027600.1	Wheat	cytosol, golgi	66.12	61.85
Zm00001d031136_P003	Maize	plasma membrane	66.12	61.85
KXG24064	Sorghum	cytosol	65.79	61.54
Solyc01g097940.1.1	Tomato	plasma membrane	39.47	61.22
CDY09039	Canola	cytosol	62.17	60.58
Solyc01g097950.2.1	Tomato	cytosol	63.82	60.06
KRH43690	Soybean	cytosol	45.39	59.23
VIT_14s0030g01550.t01	Wine grape	cytosol	66.45	59.06
TraesCS2B01G316800.1	Wheat	cytosol	63.49	59.02
TraesCS2A01G300600.1	Wheat	cytosol	63.49	59.02
Solyc01g097920.2.1	Tomato	cytosol, plastid	66.78	57.02
Os12t0625000-01	Rice	plasma membrane	64.8	56.77
Solyc01g097930.2.1	Tomato	cytosol	59.87	56.35
HORVU2Hr1G074630.2	Barley	cytosol	52.96	55.52
TraesCS2D01G298600.2	Wheat	cytosol	63.82	54.19
Zm00001d003717_P001	Maize	cytosol	61.18	52.84
CDY23400	Canola	plastid	67.43	52.7
CDY30438	Canola	plastid	67.11	52.44
KXG26295	Sorghum	cytosol	60.2	52.29
CDY17914	Canola	plastid	67.11	52.04
CDX79804	Canola	plastid	67.11	51.52
KRG92761	Soybean	cytosol	54.93	50.45
HORVU3Hr1G040910.1	Barley	mitochondrion	5.59	50.0
VIT_14s0030g01490.t01	Wine grape	cytosol	68.75	47.61
HORVU5Hr1G015070.1	Barley	extracellular	10.53	47.06
TraesCS5A01G022200.1	Wheat	plastid	65.46	46.5
CDX89032	Canola	plastid	65.46	46.39
CDY45790	Canola	plastid	65.13	46.37
TraesCS5B01G018700.3	Wheat	plastid	66.45	46.01
HORVU5Hr1G005980.2	Barley	plastid	65.79	45.77
CDY48919	Canola	endoplasmic reticulum	46.38	44.76
CDX71737	Canola	mitochondrion	53.95	44.57
CDX89116	Canola	mitochondrion	53.62	44.29
CDY43932	Canola	mitochondrion	53.29	44.02
CDY29946	Canola	plastid	55.92	43.37
CDY21176	Canola	plastid	55.26	42.75
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	25.0	40.64
CDY68838	Canola	mitochondrion	12.17	27.21
HORVU1Hr1G031220.3	Barley	plastid	35.86	26.78
CDY52906	Canola	plastid	30.92	21.76
CDY53756	Canola	endoplasmic reticulum	31.25	21.69

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	GO:A0A078HYW4	UniProt:A0A078HYW4
EnsemblPlants:CDY41913	ProteinID:CDY41913	ProteinID:CDY41913.1	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	EnsemblPlantsGene:GSBRNA2T00073895001	InterPro:P-phosphate_BS
PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	MetaCyc:PWY-6936
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniPathway:UPA00136	UniParc:UPI0004EECD42
SEG:seg	:	:	:	:	:

Description

BnaC05g46910DCysteine synthase [Source:UniProtKB/TrEMBL;Acc:A0A078HYW4]

Coordinates

chrLK032510:+:161437..163169

Molecular Weight (calculated)

32414.5 Da

IEP (calculated)

8.052

GRAVY (calculated)

0.029

Length

304 amino acids

Sequence
(BLAST)

001: MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEPTSGN TGIGLAFVGA ARGYKVVLTL PQTMSLERKT VLIALGADVH
101: LTDPRRGVKG LYEKANEILS KTPDGIILHQ FKNPANPQTH YRTTGPEIWR DSAGEVDILV GGVGTGGTIS GAGKFLKEKK KDFKVYAVEP KESAVLSGCK
201: PRLHLIQGIG AGIIPDNLDF SIVDEIIQVP GLEAIETARL IALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVVFPS GGERYISTEL FDSVRREAES
301: MTFE

Best Arabidopsis Sequence Match ( AT3G04940.2 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.