Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_19s0014g03380.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G28020.1 | VIT_19s0014g03380.t01 | AT5G54390.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0030g01550.t01 | Wine grape | cytosol | 87.93 | 83.04 |
| KRH34052 | Soybean | cytosol | 76.78 | 76.54 |
| KRG92757 | Soybean | cytosol | 76.47 | 76.47 |
| GSMUA_Achr9P25760_001 | Banana | cytosol | 76.47 | 76.23 |
| KRH13764 | Soybean | cytosol | 75.54 | 76.01 |
| GSMUA_Achr3P30900_001 | Banana | cytosol, unclear | 76.47 | 76.0 |
| GSMUA_Achr11P... | Banana | cytosol | 75.54 | 75.31 |
| GSMUA_Achr4P21350_001 | Banana | cytosol | 75.54 | 75.08 |
| KRH34037 | Soybean | cytosol | 74.61 | 74.61 |
| KXG24064 | Sorghum | cytosol | 74.92 | 74.46 |
| Zm00001d031136_P003 | Maize | plasma membrane | 74.92 | 74.46 |
| TraesCS5D01G027600.1 | Wheat | cytosol, golgi | 74.3 | 73.85 |
| Solyc01g097950.2.1 | Tomato | cytosol | 73.06 | 73.06 |
| VIT_14s0030g01490.t01 | Wine grape | cytosol | 98.76 | 72.67 |
| CDY69239 | Canola | cytosol | 72.14 | 72.59 |
| CDX74160 | Canola | cytosol | 71.21 | 71.65 |
| AT3G04940.1 | Thale cress | cytosol | 71.52 | 71.3 |
| AT5G28020.1 | Thale cress | cytosol | 71.21 | 71.21 |
| CDY52498 | Canola | cytosol | 71.21 | 71.21 |
| CDY05586 | Canola | cytosol | 71.21 | 71.21 |
| CDY50768 | Canola | cytosol | 70.59 | 71.03 |
| CDY41911 | Canola | cytosol | 70.28 | 70.72 |
| Solyc01g097930.2.1 | Tomato | cytosol | 70.59 | 70.59 |
| Bra036115.1-P | Field mustard | cytosol | 70.28 | 70.28 |
| CDY00007 | Canola | cytosol | 69.97 | 69.97 |
| KRH43690 | Soybean | cytosol | 50.46 | 69.96 |
| CDY41913 | Canola | cytosol | 65.33 | 69.41 |
| Solyc01g097920.2.1 | Tomato | cytosol, plastid | 76.47 | 69.38 |
| AT5G28030.2 | Thale cress | cytosol | 69.35 | 69.35 |
| CDY19703 | Canola | cytosol | 69.35 | 69.35 |
| TraesCS2B01G316800.1 | Wheat | cytosol | 69.66 | 68.81 |
| Os12t0625000-01 | Rice | plasma membrane | 73.68 | 68.59 |
| TraesCS2A01G300600.1 | Wheat | cytosol | 69.35 | 68.5 |
| Solyc01g097940.1.1 | Tomato | plasma membrane | 41.49 | 68.37 |
| CDX86187 | Canola | cytosol | 63.78 | 67.76 |
| Bra009985.1-P | Field mustard | cytosol | 57.89 | 67.51 |
| CDX80680 | Canola | cytosol | 63.47 | 67.43 |
| HORVU2Hr1G074630.2 | Barley | cytosol | 60.37 | 67.24 |
| CDY19702 | Canola | mitochondrion | 70.28 | 64.67 |
| CDY00008 | Canola | mitochondrion | 69.66 | 64.1 |
| Bra036114.1-P | Field mustard | cytosol | 67.49 | 63.74 |
| TraesCS2D01G298600.2 | Wheat | cytosol | 70.28 | 63.41 |
| VIT_14s0030g01540.t01 | Wine grape | cytosol, mitochondrion, plastid | 76.16 | 63.08 |
| KXG26295 | Sorghum | cytosol | 67.49 | 62.29 |
| Zm00001d003717_P001 | Maize | cytosol | 66.87 | 61.36 |
| KRG92761 | Soybean | cytosol | 61.61 | 60.12 |
| VIT_05s0094g00780.t01 | Wine grape | plastid | 70.59 | 59.69 |
| Bra001131.1-P | Field mustard | mitochondrion | 72.45 | 58.5 |
| CDY41915 | Canola | cytosol | 11.15 | 58.06 |
| HORVU3Hr1G040910.1 | Barley | mitochondrion | 5.88 | 55.88 |
| TraesCS5A01G022200.1 | Wheat | plastid | 73.68 | 55.61 |
| TraesCS5B01G018700.3 | Wheat | plastid | 74.3 | 54.67 |
| HORVU5Hr1G005980.2 | Barley | plastid | 73.68 | 54.46 |
| VIT_08s0056g00820.t01 | Wine grape | plastid | 62.54 | 51.79 |
| VIT_15s0046g02300.t01 | Wine grape | mitochondrion | 59.13 | 51.48 |
| Bra020605.1-P | Field mustard | mitochondrion | 69.04 | 51.38 |
| VIT_04s0044g00250.t01 | Wine grape | mitochondrion | 54.49 | 49.03 |
| Bra040417.1-P | Field mustard | cytosol | 46.44 | 48.08 |
| HORVU5Hr1G082120.2 | Barley | mitochondrion, plastid | 27.55 | 47.59 |
| HORVU5Hr1G015070.1 | Barley | extracellular | 9.91 | 47.06 |
| VIT_14s0030g01560.t01 | Wine grape | endoplasmic reticulum, extracellular | 79.57 | 36.66 |
| HORVU1Hr1G031220.3 | Barley | plastid | 40.25 | 31.94 |
| VIT_19s0015g00380.t01 | Wine grape | plastid | 34.37 | 26.37 |
Protein Annotations
| KEGG:00270+2.5.1.47 | KEGG:00920+2.5.1.47 | EntrezGene:100854639 | wikigene:100854639 | EntrezGene:100854804 | wikigene:100854804 |
| Gene3D:3.40.50.1100 | MapMan:50.2.5 | EMBL:AM437531 | EMBL:AM455579 | ProteinID:CAN71717 | ProteinID:CAN71717.1 |
| ProteinID:CAN76754 | ProteinID:CAN76754.1 | ProteinID:CBI34223 | ProteinID:CBI34223.3 | InterPro:CysK | InterPro:Cys_synth |
| UniProt:D7TUP8 | EMBL:FN596249 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004124 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006535 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019344 |
| GO:GO:0030170 | EntrezGene:LOC100854639 | wikigene:LOC100854639 | EntrezGene:LOC100854804 | wikigene:LOC100854804 | InterPro:P-phosphate_BS |
| PFAM:PF00291 | InterPro:PLP-dep | ScanProsite:PS00901 | PANTHER:PTHR10314 | PANTHER:PTHR10314:SF97 | SUPFAM:SSF53686 |
| TIGR:TC54038 | TIGR:TC55999 | TIGRFAMs:TIGR01136 | TIGRFAMs:TIGR01139 | InterPro:Trypto_synt_PLP_dependent | UniParc:UPI0001BE4288 |
| ArrayExpress:VIT_14s0030g01520 | EnsemblPlantsGene:VIT_14s0030g01520 | EnsemblPlants:VIT_14s0030g01520.t01 | unigene:Vvi.11338 | RefSeq:XP_003633659 | RefSeq:XP_003633659.1 |
| RefSeq:XP_003633662 | RefSeq:XP_003633662.1 | RefSeq:XP_003633663 | RefSeq:XP_003633663.1 | RefSeq:XP_019080448.1 | RefSeq:XP_019080449.1 |
| SEG:seg | : | : | : | : | : |
Description
Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:D7TUP8]
Coordinates
chr14:+:6132781..6138218
Molecular Weight (calculated)
34188.5 Da
IEP (calculated)
4.660
GRAVY (calculated)
0.121
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKCAIAKD VTELIGNTPM VYLNNVVDGC VAHIAAKLEM MEPCSSVKDR IGYSMINDAE EKGLITPGKT VLIEPTSGNT GIGLAFIAAA KGYKLILVMP
101: SVVTLERKMV VLAFGAELYL TDIAKGIQGV FDKAEEILQN TPNGYILNQF ENPANPKIHY ETTGPEIWKG TGGKVDILVA GIGTGGTVTG AGHFLKEKNP
201: EIKVYGIEPA ESAVLNGGNP GSHKIQGIGA GIIPKVLDTE LLDEVIQISS DEAIETARLL ALKEGLLVGI SSGAAAAAAI KLAKSPENAG KLITVIFPSF
301: GERYLSSVLF DSIRDEAENM KFD
101: SVVTLERKMV VLAFGAELYL TDIAKGIQGV FDKAEEILQN TPNGYILNQF ENPANPKIHY ETTGPEIWKG TGGKVDILVA GIGTGGTVTG AGHFLKEKNP
201: EIKVYGIEPA ESAVLNGGNP GSHKIQGIGA GIIPKVLDTE LLDEVIQISS DEAIETARLL ALKEGLLVGI SSGAAAAAAI KLAKSPENAG KLITVIFPSF
301: GERYLSSVLF DSIRDEAENM KFD
001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA
Arabidopsis Description
OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.