Factsheet for Bra040417.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41915	Canola	cytosol	14.1	70.97
Bra036115.1-P	Field mustard	cytosol	50.64	48.92
KRG92757	Soybean	cytosol	48.72	47.06
KRH34052	Soybean	cytosol	48.72	46.91
VIT_14s0030g01520.t01	Wine grape	cytosol	48.08	46.44
KRH34037	Soybean	cytosol	47.76	46.13
Bra009985.1-P	Field mustard	cytosol	40.71	45.85
KRH13764	Soybean	cytosol	47.12	45.79
Solyc01g097950.2.1	Tomato	cytosol	46.79	45.2
GSMUA_Achr11P...	Banana	cytosol	46.79	45.06
Bra036114.1-P	Field mustard	cytosol	48.72	44.44
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	46.15	44.31
GSMUA_Achr9P25760_001	Banana	cytosol	45.51	43.83
Zm00001d031136_P003	Maize	plasma membrane	45.19	43.38
KXG24064	Sorghum	cytosol	45.19	43.38
Bra039708.1-P	Field mustard	cytosol	44.55	43.17
TraesCS5D01G027600.1	Wheat	cytosol, golgi	44.87	43.08
VIT_14s0030g01550.t01	Wine grape	cytosol	47.12	42.98
GSMUA_Achr4P21350_001	Banana	cytosol	44.55	42.77
Solyc01g097930.2.1	Tomato	cytosol	44.23	42.72
Bra036910.1-P	Field mustard	plastid	43.59	42.63
Bra001131.1-P	Field mustard	mitochondrion	54.49	42.5
Solyc01g097920.2.1	Tomato	cytosol, plastid	46.47	40.73
TraesCS2A01G300600.1	Wheat	cytosol	42.31	40.37
TraesCS2B01G316800.1	Wheat	cytosol	42.31	40.37
Os12t0625000-01	Rice	plasma membrane	43.91	39.48
TraesCS2D01G298600.2	Wheat	cytosol	42.63	37.15
Zm00001d003717_P001	Maize	cytosol	41.67	36.93
KXG26295	Sorghum	cytosol	40.71	36.29
Bra037682.1-P	Field mustard	plastid	45.19	36.25
Bra020605.1-P	Field mustard	mitochondrion	50.32	36.18
KRH43690	Soybean	cytosol	26.6	35.62
Bra004781.1-P	Field mustard	plastid	44.55	35.1
VIT_14s0030g01490.t01	Wine grape	cytosol	47.76	33.94
HORVU2Hr1G074630.2	Barley	cytosol	31.41	33.79
Bra014529.1-P	Field mustard	plastid	45.51	33.65
Solyc01g097940.1.1	Tomato	plasma membrane	20.83	33.16
KRG92761	Soybean	cytosol	34.62	32.63
Bra014436.1-P	Field mustard	mitochondrion	38.46	32.61
Bra007604.1-P	Field mustard	mitochondrion	38.46	32.61
TraesCS5A01G022200.1	Wheat	plastid	44.23	32.24
TraesCS5B01G018700.3	Wheat	plastid	45.19	32.12
HORVU5Hr1G005980.2	Barley	plastid	44.55	31.81
Bra036448.1-P	Field mustard	plastid	37.5	29.77
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	14.74	24.6
HORVU5Hr1G015070.1	Barley	extracellular	4.81	22.06
HORVU3Hr1G040910.1	Barley	mitochondrion	1.92	17.65
Bra038025.1-P	Field mustard	plastid	21.15	15.28
HORVU1Hr1G031220.3	Barley	plastid	19.55	14.99

Protein Annotations

EnsemblPlants:Bra040417.1	EnsemblPlants:Bra040417.1-P	EnsemblPlantsGene:Bra040417	Gene3D:3.40.50.1100	InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent
PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	PFAM:PF00291	SEG:seg	SUPFAM:SSF53686	UniParc:UPI000253ED05
UniProt:M4FH39	MapMan:50.2.5	:	:	:	:

Description

AT3G04940 (E=1e-034) ATCYSD1, CYSD1 | CYSD1 (CYSTEINE SYNTHASE D1); cysteine synthase

Coordinates

chrScaffold000203:+:99483..103984

Molecular Weight (calculated)

33652.2 Da

IEP (calculated)

9.598

GRAVY (calculated)

0.035

Length

312 amino acids

Sequence
(BLAST)

001: MEYSIKDDVT QNILIEPTSG NTGIGIAMVG AARGYKVSHY ETTGPEIWRD SAEKVDMLVV GVGTGGTISG AGKFLKEKNK DFKVYGVEPA ESAVLKLTTL
101: VLEHSTLIFK QKKIINIRIK VNIRRQPEIW RDSAEKVDML VVGVGTGGTI SGAGKFLKEK NKDFKVYGVE PAESAVLKLT TLVLEHSTLI FKQKKIINIR
201: IKVNIRRQPG PHGIQGIGAG LIPDNLDFSV LDEVIQVTSV EAIETAKLLA LKEGLLVGIS SGAAAAAAIK VAKRPENAGK LIVVVFPSGG ERYLSTPMFD
301: SIRCEAENLA IE

Best Arabidopsis Sequence Match ( AT3G04940.1 )
(BLAST)

001: MEEDRCSIKD DATQLIGNTP MVYLNNIVDG CVARIAAKLE MMEPCSSVKE RIAYGMIKDA EDKGLITPGK STLIEATSGN TGIGLAFIGA AKGYKVVLTM
101: PSSMSLERKI ILLALGAEVH LTDPSKGVQG IIDKAEEICS KNPDSIMLEQ FKNPSNPQTH YRTTGPEIWR DSAGEVDILV AGVGTGGTLS GSGRFLKEKN
201: KDFKVYGVEP TESAVISGGK PGTHLIQGIG AGLIPDNLDF NVLDEVIQVT SVEAIETAKL LALKEGLLVG ISSGAAAAAA IKVAKRPENA GKLIVVIFPS
301: GGERYLSTSL FESVRHEAEN LPIQ

Arabidopsis Description

CYSD1Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 [Source:UniProtKB/Swiss-Prot;Acc:Q9S6Z7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.