Factsheet for Bra036114.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002992.1-P
Bra022717.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G28020.1	Bra002992.1-P	AT5G54390.1	21798944
AT5G28020.1	Bra022717.1-P	AT5G54390.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19703	Canola	cytosol	91.23	96.59
CDY00007	Canola	cytosol	90.64	95.98
Bra009985.1-P	Field mustard	cytosol	68.71	84.84
AT5G28020.1	Thale cress	cytosol	78.66	83.28
Bra036115.1-P	Field mustard	cytosol	76.61	81.11
KRH13764	Soybean	cytosol	64.62	68.85
VIT_14s0030g01520.t01	Wine grape	cytosol	63.74	67.49
KRG92757	Soybean	cytosol	63.45	67.18
KRH34052	Soybean	cytosol	63.16	66.67
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	63.16	66.46
GSMUA_Achr11P...	Banana	cytosol	61.99	65.43
KRH34037	Soybean	cytosol	61.7	65.33
Solyc01g097940.1.1	Tomato	plasma membrane	37.13	64.8
HORVU3Hr1G040910.1	Barley	mitochondrion	6.43	64.71
Zm00001d031136_P003	Maize	plasma membrane	61.4	64.62
KXG24064	Sorghum	cytosol	61.11	64.31
GSMUA_Achr4P21350_001	Banana	cytosol	61.11	64.31
GSMUA_Achr9P25760_001	Banana	cytosol	60.82	64.2
TraesCS5D01G027600.1	Wheat	cytosol, golgi	60.82	64.0
KRH43690	Soybean	cytosol	43.57	63.95
Solyc01g097950.2.1	Tomato	cytosol	60.23	63.78
Bra039708.1-P	Field mustard	cytosol	59.65	63.35
Bra036910.1-P	Field mustard	plastid	58.77	63.01
Bra020605.1-P	Field mustard	mitochondrion	78.95	62.21
Solyc01g097920.2.1	Tomato	cytosol, plastid	64.62	62.08
Solyc01g097930.2.1	Tomato	cytosol	58.48	61.92
VIT_14s0030g01550.t01	Wine grape	cytosol	61.4	61.4
Os12t0625000-01	Rice	plasma membrane	60.82	59.94
TraesCS2B01G316800.1	Wheat	cytosol	57.02	59.63
TraesCS2A01G300600.1	Wheat	cytosol	56.73	59.33
Bra001131.1-P	Field mustard	mitochondrion	69.3	59.25
HORVU2Hr1G074630.2	Barley	cytosol	47.66	56.21
KXG26295	Sorghum	cytosol	55.56	54.29
TraesCS2D01G298600.2	Wheat	cytosol	56.73	54.19
Zm00001d003717_P001	Maize	cytosol	54.97	53.41
Bra037682.1-P	Field mustard	plastid	60.23	52.96
KRG92761	Soybean	cytosol	50.88	52.57
Bra004781.1-P	Field mustard	plastid	60.23	52.02
HORVU5Hr1G015070.1	Barley	extracellular	10.23	51.47
Bra014529.1-P	Field mustard	plastid	60.82	49.29
VIT_14s0030g01490.t01	Wine grape	cytosol	63.16	49.2
Bra040417.1-P	Field mustard	cytosol	44.44	48.72
TraesCS5A01G022200.1	Wheat	plastid	60.23	48.13
TraesCS5B01G018700.3	Wheat	plastid	60.82	47.38
HORVU5Hr1G005980.2	Barley	plastid	60.23	47.14
Bra036448.1-P	Field mustard	plastid	52.34	45.55
Bra007604.1-P	Field mustard	mitochondrion	48.54	45.11
Bra014436.1-P	Field mustard	mitochondrion	48.25	44.84
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	23.39	42.78
HORVU1Hr1G031220.3	Barley	plastid	34.5	28.99
Bra038025.1-P	Field mustard	plastid	30.41	24.07

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	EnsemblPlantsGene:Bra036114	EnsemblPlants:Bra036114.1
EnsemblPlants:Bra036114.1-P	InterPro:CysK	InterPro:Cys_synth	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0019344	UniProt:M4F4W0	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep
ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF97	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139
InterPro:Trypto_synt_PLP_dependent	UniParc:UPI0002541F46	SEG:seg	:	:	:

Description

AT5G28020 (E=3e-091) CYSD2, ATCYSD2 | CYSD2 (CYSTEINE SYNTHASE D2); catalytic/ cysteine synthase/ pyridoxal phosphate binding

Coordinates

chrA09:+:2650937..2652634

Molecular Weight (calculated)

36898.0 Da

IEP (calculated)

5.518

GRAVY (calculated)

0.020

Length

342 amino acids

Sequence
(BLAST)

001: MEDGCMIKKD VTELIGYTPM VYLNRIVDGC VARIAAKLEM MQPCSSVKDR IAYSMIKDAE DKGLIKPGES TLIEPTAGNT GIGLACIGAA RGYKVTLLMP
101: STMSLERRII LKALGAELHL TDMSIGIKGL LEKTEEMLNK TPGGFVPQQF ENLANPEIHY QTTGPEIWRD SAGKVDIFIA GVGTGGTVTG VGRFLKEMNK
201: DIKRVQYSVE ENQVSQETLF PLSSFPKRFC ISNHNAFEPG RHLIQGIGAG IIPANLDLSI VDEIIQVTGE EAIETAKLLA LKEGLLVGIS SGAAAAAALK
301: VAKRPENAGK LIAVLFPSGG ERYLSTKLFD SVRFEAENLP VE

Best Arabidopsis Sequence Match ( AT5G28020.2 )
(BLAST)

001: MEDRCLIKND ITELIGNTPM VYLNNVVDGC VARIAAKLEM MEPCSSVKDR IAYSMIKDAE DKGLITPGKS TLIEPTAGNT GIGLACMGAA RGYKVILVMP
101: STMSLERRII LRALGAELHL SDQRIGLKGM LEKTEAILSK TPGGYIPQQF ENPANPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTATG VGKFLKEQNK
201: DIKVCVVEPV ESPVLSGGQP GPHLIQGIGS GIVPFNLDLT IVDEIIQVAG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIVVVFPSG
301: GERYLSTKLF DSIRYEAENL PIE

Arabidopsis Description

CYSD2Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.