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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002992.1-P
Bra022717.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G28020.1 Bra002992.1-P AT5G54390.1 21798944
AT5G28020.1 Bra022717.1-P AT5G54390.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86187 Canola cytosol 98.56 89.8
CDX80680 Canola cytosol 97.47 88.82
AT5G28020.1 Thale cress cytosol 88.09 75.54
Bra036115.1-P Field mustard cytosol 86.64 74.3
Bra036114.1-P Field mustard cytosol 84.84 68.71
Solyc01g097940.1.1 Tomato plasma membrane 47.29 66.84
KRH13764 Soybean cytosol 70.4 60.75
KRG92757 Soybean cytosol 68.59 58.82
HORVU3Hr1G040910.1 Barley mitochondrion 7.22 58.82
GSMUA_Achr3P30900_001 Banana cytosol, unclear 68.23 58.15
VIT_14s0030g01520.t01 Wine grape cytosol 67.51 57.89
GSMUA_Achr11P... Banana cytosol 67.15 57.41
KRH34052 Soybean cytosol 67.15 57.41
Zm00001d031136_P003 Maize plasma membrane 66.79 56.92
KXG24064 Sorghum cytosol 66.79 56.92
Bra039708.1-P Field mustard cytosol 66.06 56.83
Bra036910.1-P Field mustard plastid 65.34 56.74
GSMUA_Achr9P25760_001 Banana cytosol 66.06 56.48
TraesCS5D01G027600.1 Wheat cytosol, golgi 66.06 56.31
GSMUA_Achr4P21350_001 Banana cytosol 65.7 56.0
KRH34037 Soybean cytosol 64.98 55.73
VIT_14s0030g01550.t01 Wine grape cytosol 68.23 55.26
Solyc01g097950.2.1 Tomato cytosol 64.26 55.11
Bra020605.1-P Field mustard mitochondrion 86.28 55.07
Solyc01g097930.2.1 Tomato cytosol 63.54 54.49
KRH43690 Soybean cytosol 44.77 53.22
TraesCS2B01G316800.1 Wheat cytosol 62.82 53.21
TraesCS2A01G300600.1 Wheat cytosol 62.45 52.91
Os12t0625000-01 Rice plasma membrane 65.7 52.45
Bra001131.1-P Field mustard mitochondrion 75.45 52.25
Solyc01g097920.2.1 Tomato cytosol, plastid 67.15 52.25
HORVU2Hr1G074630.2 Barley cytosol 51.26 48.97
KXG26295 Sorghum cytosol 61.73 48.86
TraesCS2D01G298600.2 Wheat cytosol 62.82 48.6
HORVU5Hr1G015070.1 Barley extracellular 11.91 48.53
Zm00001d003717_P001 Maize cytosol 60.29 47.44
Bra037682.1-P Field mustard plastid 64.62 46.02
Bra004781.1-P Field mustard plastid 65.7 45.96
KRG92761 Soybean cytosol 52.35 43.81
Bra014529.1-P Field mustard plastid 64.98 42.65
TraesCS5A01G022200.1 Wheat plastid 65.7 42.52
VIT_14s0030g01490.t01 Wine grape cytosol 66.79 42.14
TraesCS5B01G018700.3 Wheat plastid 66.43 41.91
HORVU5Hr1G005980.2 Barley plastid 65.7 41.65
Bra040417.1-P Field mustard cytosol 45.85 40.71
Bra014436.1-P Field mustard mitochondrion 52.35 39.4
Bra007604.1-P Field mustard mitochondrion 52.35 39.4
Bra036448.1-P Field mustard plastid 52.71 37.15
HORVU5Hr1G082120.2 Barley mitochondrion, plastid 18.05 26.74
HORVU1Hr1G031220.3 Barley plastid 31.77 21.62
Bra038025.1-P Field mustard plastid 29.24 18.75
Protein Annotations
EnsemblPlants:Bra009985.1EnsemblPlants:Bra009985.1-PEnsemblPlantsGene:Bra009985Gene3D:3.40.50.1100GO:GO:0006535GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:P-phosphate_BSInterPro:PLP-depInterPro:Trypto_synt_PLP_dependent
PANTHER:PTHR10314PANTHER:PTHR10314:SF97PFAM:PF00291ScanProsite:PS00901SEG:segSUPFAM:SSF53686
UniParc:UPI000253F523UniProt:M4D0I7MapMan:50.2.5:::
Description
AT5G28020 (E=1e-077) CYSD2, ATCYSD2 | CYSD2 (CYSTEINE SYNTHASE D2); catalytic/ cysteine synthase/ pyridoxal phosphate binding
Coordinates
chrA06:-:18466744..18468300
Molecular Weight (calculated)
29489.0 Da
IEP (calculated)
4.505
GRAVY (calculated)
0.112
Length
277 amino acids
Sequence
(BLAST)
001: MEDRCLIKND VTELIGNTPM VYLNKIADGC VARIAAKLEM MEPCSSIKDR IAYSMIKDAE DKGLITPGES TLIEPTAGNT GIGLACIGAA RGYKVIILMS
101: SSMSLERRII LRALGAELLL TDRSIGFKGM LEKTEEMLSK TPGGFVPQQF ENPSNPEVCA VEPTESPVLS GGEPGPHLIQ GIGAGIIPTN LDLTIVDEII
201: QVTGEEAIET AKLLALKEGL LVGISSGATA AAALKVAKRP ENEGKLIVVI FASGGERYLS TKLFDSVRYE AENLPIE
Best Arabidopsis Sequence Match ( AT5G28020.2 )
(BLAST)
001: MEDRCLIKND ITELIGNTPM VYLNNVVDGC VARIAAKLEM MEPCSSVKDR IAYSMIKDAE DKGLITPGKS TLIEPTAGNT GIGLACMGAA RGYKVILVMP
101: STMSLERRII LRALGAELHL SDQRIGLKGM LEKTEAILSK TPGGYIPQQF ENPANPEIHY RTTGPEIWRD SAGKVDILVA GVGTGGTATG VGKFLKEQNK
201: DIKVCVVEPV ESPVLSGGQP GPHLIQGIGS GIVPFNLDLT IVDEIIQVAG EEAIETAKLL ALKEGLLVGI SSGAAAAAAL KVAKRPENAG KLIVVVFPSG
301: GERYLSTKLF DSIRYEAENL PIE
Arabidopsis Description
CYSD2Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXS7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.