Factsheet for VIT_04s0044g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g02300.t01	Wine grape	mitochondrion	94.43	91.37
PGSC0003DMT400000156	Potato	mitochondrion	79.94	82.71
PGSC0003DMT400016646	Potato	mitochondrion	79.11	80.91
Solyc10g012370.2.1	Tomato	mitochondrion	79.11	80.91
KRH00797	Soybean	mitochondrion	83.57	80.65
KRH40428	Soybean	mitochondrion	83.57	80.43
Solyc01g094790.2.1	Tomato	plastid	79.67	80.11
PGSC0003DMT400064098	Potato	cytosol	16.71	76.92
AT3G61440.1	Thale cress	mitochondrion	75.21	73.37
Bra007604.1-P	Field mustard	mitochondrion	74.09	72.28
CDX89116	Canola	mitochondrion	74.09	72.28
CDX71737	Canola	mitochondrion	74.09	72.28
Bra014436.1-P	Field mustard	mitochondrion	74.09	72.28
CDY43932	Canola	mitochondrion	73.82	72.01
GSMUA_Achr5P19480_001	Banana	mitochondrion	69.64	69.64
CDY48919	Canola	endoplasmic reticulum	60.17	68.57
PGSC0003DMT400034224	Potato	cytosol	13.93	68.49
HORVU7Hr1G023500.1	Barley	cytosol	20.06	67.92
Solyc04g058120.1.1	Tomato	mitochondrion	16.71	65.93
Os04t0165700-01	Rice	mitochondrion	67.97	64.72
TraesCS5B01G300800.1	Wheat	mitochondrion	66.85	63.49
Zm00001d004413_P002	Maize	mitochondrion	67.41	63.35
EES11801	Sorghum	mitochondrion	67.69	62.95
TraesCS5A01G300400.1	Wheat	mitochondrion	66.3	62.63
PGSC0003DMT400021594	Potato	cytosol	17.55	62.38
PGSC0003DMT400040030	Potato	cytosol	18.38	61.68
PGSC0003DMT400012263	Potato	cytosol	18.11	60.75
KRH74905	Soybean	cytosol	12.81	57.5
VIT_14s0030g01520.t01	Wine grape	cytosol	49.03	54.49
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	66.57	52.41
VIT_05s0094g00780.t01	Wine grape	plastid	52.65	49.48
VIT_14s0030g01550.t01	Wine grape	cytosol	47.08	49.42
VIT_14s0030g01540.t01	Wine grape	cytosol, mitochondrion, plastid	48.19	44.36
CDY68838	Canola	mitochondrion	16.43	43.38
PGSC0003DMT400080490	Potato	cytosol, mitochondrion, nucleus, plastid	15.88	43.18
VIT_14s0030g01490.t01	Wine grape	cytosol	48.75	39.86
VIT_08s0056g00820.t01	Wine grape	plastid	42.9	39.49
VIT_14s0030g01560.t01	Wine grape	endoplasmic reticulum, extracellular	52.09	26.68
VIT_19s0015g00380.t01	Wine grape	plastid	26.18	22.33

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00460+4.4.1.9	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:50.2.5	InterPro:CAS
ProteinID:CCB60462	ProteinID:CCB60462.1	InterPro:CysK	InterPro:Cys_synth	UniProt:F6I0J6	EMBL:FN596506
GO:GO:0003674	GO:GO:0003824	GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0019499
GO:GO:0030170	GO:GO:0050017	InterPro:P-phosphate_BS	PFAM:PF00291	InterPro:PLP-dep	ScanProsite:PS00901
PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent
UniParc:UPI000210A7D6	ArrayExpress:VIT_04s0044g00250	EnsemblPlantsGene:VIT_04s0044g00250	EnsemblPlants:VIT_04s0044g00250.t01	RefSeq:XP_003631922	RefSeq:XP_003631922.1
SEG:seg	:	:	:	:	:

Description

Cysteine synthase [Source:UniProtKB/TrEMBL;Acc:F6I0J6]

Coordinates

chr4:+:20937375..20940114

Molecular Weight (calculated)

39247.2 Da

IEP (calculated)

10.017

GRAVY (calculated)

-0.140

Length

359 amino acids

Sequence
(BLAST)

001: MAALSSFFKR KSSIPLTRWF STQPILESPS FSRRIRDLPK DLPGTNIKKE VSQLIGKTPL VFLNKVTEGC GAYVAVKQEM MQPTASIKDR PALAMMTDAE
101: NKHLITPGKT VLIEPTSGNM GISMAFMAAM KGYKMVLTMP SYTSLERRVT MRAFGADLIL TDPTKGMGGT VKKAYELLES TPDAFMLQQF SNPANTQVQR
201: YGRILMDKLT FIMGIGSGGT VSGVGRYLKS QNPNVKIYGL EPTESNVLNG GKPGPHHITG NGVGFKPDIL DMDVMEEVLM VSSEDAVNMA RQLALKEGLM
301: VGISSGANTV AALRLARMPE NRGKLIVTVH PSFGERYLSS VLFQELRKEA ENMQPVSVD

Best Arabidopsis Sequence Match ( AT3G61440.1 )
(BLAST)

001: MASVSRRLLR RETIPCFSHT VRKLFSTVGS PSFAQRLRDL PKDFPSTNAK RDASLLIGKT PLVFLNKVTE GCEAYVAAKQ EHFQPTCSIK DRPAIAMIAD
101: AEKKKLIIPG KTTLIEPTSG NMGISLAFMA AMKGYRIIMT MPSYTSLERR VTMRSFGAEL VLTDPAKGMG GTVKKAYDLL DSTPDAFMCQ QFANPANTQI
201: HFDTTGPEIW EDTLGNVDIF VMGIGSGGTV SGVGRYLKSK NPNVKIYGVE PAESNILNGG KPGPHAITGN GVGFKPEILD MDVMESVLEV SSEDAIKMAR
301: ELALKEGLMV GISSGANTVA AIRLAKMPEN KGKLIVTIHA SFGERYLSSV LFDELRKEAE EMKPVSVD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.