Factsheet for Solyc04g058120.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034224	Potato	cytosol	43.96	54.79
PGSC0003DMT400012263	Potato	cytosol	57.14	48.6
PGSC0003DMT400040030	Potato	cytosol	53.85	45.79
PGSC0003DMT400064098	Potato	cytosol	30.77	35.9
HORVU7Hr1G023500.1	Barley	cytosol	32.97	28.3
CDY48919	Canola	endoplasmic reticulum	62.64	18.1
Solyc01g094790.2.1	Tomato	plastid	68.13	17.37
VIT_04s0044g00250.t01	Wine grape	mitochondrion	65.93	16.71
VIT_15s0046g02300.t01	Wine grape	mitochondrion	68.13	16.71
Solyc10g012370.2.1	Tomato	mitochondrion	62.64	16.24
KRH00797	Soybean	mitochondrion	63.74	15.59
Bra007604.1-P	Field mustard	mitochondrion	62.64	15.49
CDX71737	Canola	mitochondrion	62.64	15.49
KRH40428	Soybean	mitochondrion	62.64	15.28
AT3G61440.1	Thale cress	mitochondrion	61.54	15.22
Bra014436.1-P	Field mustard	mitochondrion	61.54	15.22
CDY43932	Canola	mitochondrion	61.54	15.22
CDX89116	Canola	mitochondrion	61.54	15.22
GSMUA_Achr5P19480_001	Banana	mitochondrion	59.34	15.04
KRH74905	Soybean	cytosol	13.19	15.0
Os04t0165700-01	Rice	mitochondrion	58.24	14.06
TraesCS5B01G300800.1	Wheat	mitochondrion	58.24	14.02
TraesCS5A01G300400.1	Wheat	mitochondrion	58.24	13.95
Zm00001d004413_P002	Maize	mitochondrion	58.24	13.87
EES11801	Sorghum	mitochondrion	58.24	13.73
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	42.86	12.0
Solyc08g014340.2.1	Tomato	plastid	50.55	11.92
Solyc01g097930.2.1	Tomato	cytosol	40.66	11.46
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	57.14	11.4
Solyc01g097950.2.1	Tomato	cytosol	38.46	10.84
Solyc01g097920.2.1	Tomato	cytosol, plastid	40.66	10.39
Solyc01g097940.1.1	Tomato	plasma membrane	15.38	7.14
Solyc07g065470.2.1	Tomato	peroxisome, plasma membrane	25.27	5.46
CDY68838	Canola	mitochondrion	2.2	1.47

Protein Annotations

KEGG:00460+4.4.1.9	MapMan:35.2	InterPro:CAS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004124
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0019344	GO:GO:0019499
GO:GO:0050017	UniProt:K4BT04	PANTHER:PTHR10314	PANTHER:PTHR10314:SF80	EnsemblPlantsGene:Solyc04g058120.1	EnsemblPlants:Solyc04g058120.1.1
UniParc:UPI000276603D	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:55235010..55235538

Molecular Weight (calculated)

10458.7 Da

IEP (calculated)

8.495

GRAVY (calculated)

-0.529

Length

91 amino acids

Sequence
(BLAST)

1: MGISIAFMAM RRTVKKAYEL LESSPNVFML QHFYNPETLS LLEPTERNKL NGGKSGPHQI TGNGARFKPY ILDMDLMEEH RHWKSSEGFP C

Best Arabidopsis Sequence Match ( AT3G61440.2 )
(BLAST)

001: MIADAEKKKL IIPGKTTLIE PTSGNMGISL AFMAAMKGYR IIMTMPSYTS LERRVTMRSF GAELVLTDPA KGMGGTVKKA YDLLDSTPDA FMCQQFANPA
101: NTQIHFDTTG PEIWEDTLGN VDIFVMGIGS GGTVSGVGRY LKSKNPNVKI YGVEPAESNI LNGGKPGPHA ITGNGVGFKP EILDMDVMES VLEVSSEDAI
201: KMARELALKE GLMVGISSGA NTVAAIRLAK MPENKGKLIV TIHASFGERY LSSVLFDELR KEAEEMKPVS VD

Arabidopsis Description

CYSC1Bifunctional L-3-cyanoalanine synthase/cysteine synthase C1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9S757]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.