CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77854	Soybean	cytosol	22.46	98.65
KRG91325	Soybean	cytosol, mitochondrion, nucleus	90.15	90.15
KRG96937	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	88.92	88.92
KRH68699	Soybean	cytosol	88.62	88.62
Solyc09g082060.2.1	Tomato	cytosol, nucleus, plastid	86.46	86.46
PGSC0003DMT400082113	Potato	cytosol	86.15	86.15
CDY68436	Canola	cytosol	84.0	84.78
Bra039708.1-P	Field mustard	cytosol	84.0	84.78
CDY42795	Canola	cytosol	83.69	84.47
Bra036910.1-P	Field mustard	plastid	82.46	84.01
GSMUA_Achr4P21350_001	Banana	cytosol	84.0	84.0
AT3G22460.1	Thale cress	cytosol	64.62	84.0
CDY29778	Canola	cytosol, peroxisome, plastid	78.15	83.83
KXG24064	Sorghum	cytosol	83.69	83.69
GSMUA_Achr11P...	Banana	cytosol	83.38	83.64
KRH35519	Soybean	cytosol	78.46	83.61
Zm00001d031136_P003	Maize	plasma membrane	83.38	83.38
GSMUA_Achr9P25760_001	Banana	cytosol	83.08	83.33
AT4G14880.5	Thale cress	cytosol	82.15	82.92
CDY09039	Canola	cytosol	79.08	82.37
GSMUA_Achr3P30900_001	Banana	cytosol, unclear	81.85	81.85
TraesCS5D01G027600.1	Wheat	cytosol, golgi	81.85	81.85
HORVU3Hr1G040910.1	Barley	mitochondrion	8.31	79.41
KRH13764	Soybean	cytosol	74.15	75.08
Os12t0625000-01	Rice	plasma membrane	80.0	74.93
KRG92757	Soybean	cytosol	73.54	73.99
TraesCS2B01G316800.1	Wheat	cytosol	73.54	73.09
KRH34052	Soybean	cytosol	72.31	72.53
TraesCS2A01G300600.1	Wheat	cytosol	72.31	71.87
KRH34037	Soybean	cytosol	71.08	71.52
HORVU2Hr1G074630.2	Barley	cytosol	63.69	71.38
KRH43690	Soybean	cytosol	49.54	69.1
TraesCS2D01G298600.2	Wheat	cytosol	73.85	67.04
KXG26295	Sorghum	cytosol	72.0	66.86
Zm00001d003717_P001	Maize	cytosol	71.69	66.19
HORVU5Hr1G015070.1	Barley	extracellular	13.54	64.71
KRH50190	Soybean	nucleus, plastid	73.85	61.7
TraesCS5A01G022200.1	Wheat	plastid	80.92	61.45
KRH71273	Soybean	nucleus, plastid	73.54	60.66
TraesCS5B01G018700.3	Wheat	plastid	81.54	60.36
HORVU5Hr1G005980.2	Barley	plastid	80.92	60.18
KRG92761	Soybean	cytosol	59.08	58.01
KRH74905	Soybean	cytosol	14.15	57.5
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	32.92	57.22
KRG94935	Soybean	nucleus	61.54	53.91
KRH40428	Soybean	mitochondrion	61.85	53.89
KRH00797	Soybean	mitochondrion	61.54	53.76
KRH64961	Soybean	nucleus, plastid	61.54	53.48
HORVU1Hr1G031220.3	Barley	plastid	46.15	36.85
KRH14231	Soybean	mitochondrion	35.38	27.06
KRH73904	Soybean	cytosol	29.54	22.75

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	Gene3D:3.40.50.1100	MapMan:4.1.4.2.2	EntrezGene:547631	EMBL:ACUP02006731
EMBL:AF452451	InterPro:CysK	InterPro:Cys_synth	EnsemblPlantsGene:GLYMA_11G005800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004124	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0019344	GO:GO:0030170	ProteinID:KRH27638.1	ProteinID:KRH27639.1	EnsemblPlants:KRH27640
ProteinID:KRH27640	ProteinID:KRH27640.1	ProteinID:KRH27641.1	ProteinID:KRH27642.1	InterPro:P-phosphate_BS	PFAM:PF00291
InterPro:PLP-dep	ScanProsite:PS00901	PANTHER:PTHR10314	PANTHER:PTHR10314:SF101	MetaCyc:PWY-6936	UniProt:Q8W1A0
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000009C962	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:421078..427797

Molecular Weight (calculated)

34271.8 Da

IEP (calculated)

5.538

GRAVY (calculated)

0.116

Length

325 amino acids

Sequence
(BLAST)

001: MAVERSGIAK DVTELIGKTP LVYLNKLADG CVARVAAKLE LMEPCSSVKD RIGYSMIADA EEKGLITPGK SVLIEPTSGN TGIGLAFMAA ARGYKLIITM
101: PASMSLERRI ILLAFGAELV LTDPAKGMKG AVQKAEEILA KTPNAYILQQ FENPANPKVH YETTGPEIWK GSDGKIDAFV SGIGTGGTIT GAGKYLKEQN
201: PNIKLIGVEP VESPVLSGGK PGPHKIQGIG AGFIPGVLEV NLLDEVIQIS SDEAIETAKL LALKEGLFVG ISSGAAAAAA FQIAKRPENA GKLIVAVFPS
301: FGERYLSSVL FESVRREAES MTFEP

Best Arabidopsis Sequence Match ( AT4G14880.5 )
(BLAST)

001: MASRIAKDVT ELIGNTPLVY LNNVAEGCVG RVAAKLEMME PCSSVKDRIG FSMISDAEKK GLIKPGESVL IEPTSGNTGV GLAFTAAAKG YKLIITMPAS
101: MSTERRIILL AFGVELVLTD PAKGMKGAIA KAEEILAKTP NGYMLQQFEN PANPKIHYET TGPEIWKGTG GKIDGFVSGI GTGGTITGAG KYLKEQNANV
201: KLYGVEPVES AILSGGKPGP HKIQGIGAGF IPSVLNVDLI DEVVQVSSDE SIDMARQLAL KEGLLVGISS GAAAAAAIKL AQRPENAGKL FVAIFPSFGE
301: RYLSTVLFDA TRKEAEAMTF EA

Arabidopsis Description

OASA1Cysteine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:P47998]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.