Factsheet for Zm00001d045327_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19309	Sorghum	cytosol	93.06	93.06
HORVU2Hr1G072450.2	Barley	cytosol	23.41	88.04
TraesCS7D01G096800.1	Wheat	cytoskeleton, cytosol, plastid	85.84	85.59
TraesCS4A01G401600.1	Wheat	cytosol	85.84	85.34
HORVU7Hr1G021860.7	Barley	cytosol	85.55	85.06
TraesCS4A01G401700.1	Wheat	cytosol	85.26	85.01
TraesCS7A01G102800.1	Wheat	cytosol	84.97	84.73
TraesCS7A01G102700.1	Wheat	cytosol	84.68	84.2
Os06t0149900-01	Rice	cytosol	83.24	83.0
Zm00001d045340_P004	Maize	cytosol	81.21	79.38
OQU75833	Sorghum	cytosol	55.78	78.78
TraesCS7D01G096700.1	Wheat	mitochondrion	85.55	74.75
HORVU7Hr1G021840.21	Barley	plastid	78.32	72.07
GSMUA_Achr2P16640_001	Banana	cytosol	69.65	70.88
Zm00001d045347_P001	Maize	mitochondrion	41.91	68.08
Zm00001d045344_P001	Maize	mitochondrion	41.62	67.61
Zm00001d045341_P003	Maize	mitochondrion	41.33	67.14
Zm00001d045350_P001	Maize	mitochondrion	35.84	59.05
Zm00001d031136_P003	Maize	plasma membrane	48.84	52.0
Zm00001d003717_P001	Maize	cytosol	49.71	48.86
Zm00001d004413_P002	Maize	mitochondrion	50.0	45.29
Zm00001d008379_P001	Maize	plastid	50.0	43.47
Zm00001d040235_P005	Maize	plastid	48.55	42.42
Zm00001d043101_P001	Maize	plastid	19.08	34.02
Zm00001d028220_P001	Maize	plastid	30.35	21.43

Protein Annotations

KEGG:00270+2.5.1.47	KEGG:00920+2.5.1.47	EntrezGene:100502310	Gene3D:3.40.50.1100	MapMan:50.2.5	ProteinID:AQL02064.1
UniProt:B6UB52	EMBL:BT087747	InterPro:CysK	InterPro:Cys_synth	EMBL:EU974467	GO:GO:0003674
GO:GO:0003824	GO:GO:0004124	GO:GO:0006535	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	PFAM:PF00291	InterPro:PLP-dep	PANTHER:PTHR10314	PANTHER:PTHR10314:SF129
SUPFAM:SSF53686	TIGRFAMs:TIGR01136	TIGRFAMs:TIGR01139	InterPro:Trypto_synt_PLP_dependent	UniParc:UPI000182EFDC	EnsemblPlantsGene:Zm00001d045327
EnsemblPlants:Zm00001d045327_P001	EnsemblPlants:Zm00001d045327_T001	SEG:seg	:	:	:

Description

Pyridoxal-5'-phosphate-dependent enzyme family protein

Coordinates

chr9:+:19066419..19069385

Molecular Weight (calculated)

36652.1 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.024

Length

346 amino acids

Sequence
(BLAST)

001: MAGEEAGRRG VPSLLNPPSA SSEGQQEHIA SDVTQLIGWT PLVELKRIAA KEGVCARIVG KVEAYQPLCS VKDRSALRMI EDAEERGLIS PGTTTLVEPT
101: SGNLGLGLVL VALRKGYRFV AVMPGQYSLD KQILLTYMGA ELYVTDPSLG FPGITAKVEE LKKELPNVHV LDQFSNRANP EAHVRWTGPE IWKDTAGKVD
201: IFVAGSGSGG TVSGVGKYLK TQNPSVKVIC VEPAESPVVS GGEPGSHKIQ GIGPGFIPEV LDTSVIDEAV TVTTEEAMAG ARRLAREEGL LVGISSGANL
301: AACLKVAARE ESKGKMIVTV FPSGGERYMT SDLFAAAREE CIAMTF

Best Arabidopsis Sequence Match ( AT3G59760.1 )
(BLAST)

001: MVAMIMASRF NREAKLASQI LSTLLGNRSC YTSMAATSSS ALLLNPLTSS SSSSTLRRFR CSPEISSLSF SSASDFSLAM KRQSRSFADG SERDPSVVCE
101: AVKRETGPDG LNIADNVSQL IGKTPMVYLN SIAKGCVANI AAKLEIMEPC CSVKDRIGYS MVTDAEQKGF ISPGKSVLVE PTSGNTGIGL AFIAASRGYR
201: LILTMPASMS MERRVLLKAF GAELVLTDPA KGMTGAVQKA EEILKNTPDA YMLQQFDNPA NPKIHYETTG PEIWDDTKGK VDIFVAGIGT GGTITGVGRF
301: IKEKNPKTQV IGVEPTESDI LSGGKPGPHK IQGIGAGFIP KNLDQKIMDE VIAISSEEAI ETAKQLALKE GLMVGISSGA AAAAAIKVAK RPENAGKLIA
401: VVFPSFGERY LSTPLFQSIR EEVEKMQPER VSG

Arabidopsis Description

OASCCysteine synthase [Source:UniProtKB/TrEMBL;Acc:B9DFR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.