Factsheet for HORVU6Hr1G063480.6

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G174200.1	Wheat	cytosol	70.2	96.53
TraesCS6B01G217200.2	Wheat	cytosol	83.08	96.48
TraesCS6A01G187300.1	Wheat	cytosol	82.58	95.89
Os02t0222100-01	Rice	cytosol	24.75	87.5
EES04772	Sorghum	cytosol	72.22	83.87
HORVU7Hr1G021860.7	Barley	cytosol	61.11	69.54
GSMUA_Achr2P16640_001	Banana	cytosol	59.09	68.82
HORVU7Hr1G087810.12	Barley	cytosol, mitochondrion	57.83	65.43
HORVU2Hr1G072450.2	Barley	cytosol	14.39	61.96
HORVU7Hr1G021840.21	Barley	plastid	57.32	60.37
HORVU2Hr1G074630.2	Barley	cytosol	35.1	47.93
HORVU7Hr1G023500.1	Barley	cytosol	12.12	45.28
HORVU3Hr1G040910.1	Barley	mitochondrion	3.54	41.18
HORVU3Hr1G079890.1	Barley	plastid	39.65	40.26
HORVU5Hr1G005980.2	Barley	plastid	41.92	37.99
HORVU5Hr1G015070.1	Barley	extracellular	6.31	36.76
HORVU2Hr1G000280.3	Barley	golgi, peroxisome, plastid	40.15	34.87
HORVU5Hr1G082120.2	Barley	mitochondrion, plastid	15.4	32.62
HORVU4Hr1G067610.1	Barley	plastid	26.52	22.29
HORVU1Hr1G031220.3	Barley	plastid	22.47	21.87

Protein Annotations

EnsemblPlants:HORVU6Hr1G063480.6	EnsemblPlantsGene:HORVU6Hr1G063480	Gene3D:3.40.50.1100	InterPro:PLP-dep	InterPro:Trypto_synt_PLP_dependent	PANTHER:PTHR10314
PANTHER:PTHR10314:SF107	PFAM:PF00291	SignalP:SignalP-noTM	SUPFAM:SSF53686	UniParc:UPI000B47B409	UniProt:A0A287UEY7
MapMan:50.2.5	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:427377535..427379873

Molecular Weight (calculated)

43234.9 Da

IEP (calculated)

7.055

GRAVY (calculated)

0.081

Length

396 amino acids

Sequence
(BLAST)

001: MLERLLFLCI HLFKTFELAR SSSFICCKIS TRVMEPQEGR KGIPSLLSSQ GECIATNITQ LIGWTPLIEL RNIAEKDGIG ARLIGKIEPY QPLSSVKDRS
101: ALRLIEDAEE RGLITPGITT LLGVTSGNLG IGVAFIAAQK GYKFIALMPA KLSLDKQILL RYLGIEVVLV GKDLRYHAPH ITCQMVTCLS PADAVQHGFK
201: ALLDRVEQLK KDVENVYVLD QFTNPANPDA HFRWTGPEIW KDTAGKVDIF IAASGSGGTI TGVGRYLKMK NPSVKLMCVE PAESPVISGG EPAFHNILGI
301: GPGFVPEILD RSQIDEIVTV TTQEAMDMAR RLAREEGLLV GISSGANAAA CLKVASREEN RGKMVVTMFS SGAERYLNSE LFAQVKEECI NVNMTL

Best Arabidopsis Sequence Match ( AT2G43750.1 )
(BLAST)

001: MAATSSSAFL LNPLTSRHRP FKYSPELSSL SLSSRKAAAF DVSSAAFTLK RQSRSDVVCK AVSIKPEAGV EGLNIADNAA QLIGKTPMVY LNNVVKGCVA
101: SVAAKLEIME PCCSVKDRIG YSMITDAEEK GLITPGKSVL VESTSGNTGI GLAFIAASKG YKLILTMPAS MSLERRVLLR AFGAELVLTE PAKGMTGAIQ
201: KAEEILKKTP NSYMLQQFDN PANPKIHYET TGPEIWEDTR GKIDILVAGI GTGGTITGVG RFIKERKPEL KVIGVEPTES AILSGGKPGP HKIQGIGAGF
301: VPKNLDLAIV DEYIAISSEE AIETSKQLAL QEGLLVGISS GAAAAAAIQV AKRPENAGKL IAVVFPSFGE RYLSTQLFQS IREECEQMQP EL

Arabidopsis Description

OASBCysteine synthase [Source:UniProtKB/TrEMBL;Acc:Q0WW95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.