Factsheet for TraesCS6A01G373800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G300600.1
TraesCS2B01G316800.1
TraesCS2D01G298600.2
TraesCS3A01G087100.1
TraesCS3B01G102500.1
TraesCS3D01G087300.1
TraesCS5A01G022200.1
TraesCS5B01G018700.3
TraesCS5D01G027600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G54390.1	TraesCS3A01G087100.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS3B01G102500.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS3D01G087300.1	AT2G43750.1	21798944
AT5G54390.1	TraesCS2A01G300600.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS2B01G316800.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS2D01G298600.2	AT3G04940.1	21798944
AT5G54390.1	TraesCS5A01G022200.1	AT3G04940.1	21798944
AT5G54390.1	TraesCS5B01G018700.3	AT3G04940.1	21798944
AT5G54390.1	TraesCS5D01G027600.1	AT3G04940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G411500.1	Wheat	plastid	90.45	90.83
TraesCS6D01G358000.1	Wheat	plastid	89.81	90.19
HORVU6Hr1G087990.4	Barley	mitochondrion	70.91	86.3
OQU85910	Sorghum	mitochondrion	75.58	79.64
GSMUA_Achr8P07520_001	Banana	cytosol	60.72	75.26
Zm00001d051988_P001	Maize	mitochondrion	70.7	74.5
GSMUA_Achr11P...	Banana	cytosol	61.15	73.47
Os02t0805500-01	Rice	cytosol	73.46	72.54
VIT_00s0301g00050.t01	Wine grape	cytosol	58.39	70.15
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	56.05	69.29
PGSC0003DMT400057610	Potato	cytosol	56.26	67.6
KRH55364	Soybean	cytosol	53.5	66.14
KRH26049	Soybean	cytosol	53.72	66.06
Bra002992.1-P	Field mustard	cytosol	52.02	65.51
CDY42446	Canola	cytosol	51.8	65.24
CDY18326	Canola	cytosol	51.38	64.53
CDY66135	Canola	cytosol	50.74	64.25
CDY48649	Canola	cytosol	50.53	63.98
AT5G54390.1	Thale cress	cytosol	50.53	63.81
Bra022717.1-P	Field mustard	cytosol	50.32	63.71
Solyc12g013560.1.1	Tomato	cytosol	51.17	62.92
PGSC0003DMT400022081	Potato	cytosol	50.32	62.04
KRH10771	Soybean	cytosol, mitochondrion, nucleus	58.81	59.57
Solyc02g078860.2.1	Tomato	plastid	56.26	59.15
KRH21552	Soybean	cytosol, mitochondrion, plastid	58.17	58.92
KRH20546	Soybean	plastid	49.04	51.11
KRH49963	Soybean	plastid	49.04	50.55
TraesCS4A01G400200.1	Wheat	cytosol, mitochondrion, plastid	31.85	41.9
TraesCS7A01G101500.1	Wheat	cytosol, mitochondrion, plastid	31.85	41.9
TraesCS5A01G119800.2	Wheat	cytosol	30.15	37.47
TraesCS2A01G206300.1	Wheat	mitochondrion	25.48	28.17
TraesCS6A01G233100.1	Wheat	mitochondrion	25.9	26.64

Protein Annotations

KEGG:00920+3.1.3.7	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	InterPro:Bisphos_HAL2	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152	GO:GO:0008441
GO:GO:0009987	GO:GO:0016787	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS
PFAM:PF00459	PRINTS:PR00377	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200	PANTHER:PTHR43200:SF5
SUPFAM:SSF56655	TIGRFAMs:TIGR01330	EnsemblPlantsGene:TraesCS6A01G373800	EnsemblPlants:TraesCS6A01G373800.1	TIGR:cd01517	SEG:seg

Description

No Description!

Coordinates

chr6A:-:596891032..596893498

Molecular Weight (calculated)

50070.5 Da

IEP (calculated)

7.819

GRAVY (calculated)

-0.136

Length

471 amino acids

Sequence
(BLAST)

001: MGGLRLSAWA AAPSPSPSSA AARGFPRSPP DWRGLERGSG RGRRSRCAPS SPPSASPALS LGAAGRLRVG ADREWLWDCR GGGLGGGGGK KDYAKEMEAA
101: VRVVQVACTL CQRVQDSLLL ADPGSGSAGV HSKLDRSPVT VADWGVQATV SWLLSDCFGD ESVSIVAEED DKTLSSSDGT ALLESVVSAV NGCLVEAPKY
201: GLRSPEKDLG AHDVLQAIRK CSSTGGPKGR FWVLDPVDGT LGFVRGDQYA IALALIEDGE VVLGVLGCPN YPMKKEWLNY HQRYYRLMSK VAPPTSGSWN
301: KGCVMYAHKG CGQAWMQPLV HDFGMLSWHN SREVQVSSVS DPVSATFCEP VEKANSSHSF TAGLAHSVGL RNQPLRVYSM VKYAAIARGD AEIFMKFARA
401: GYKEKIWDHA AGVVIIQEAG GVVTDAGGCP LDFSRGVYLE GLDRGIIACS GALLHQRILQ AVDASWNSST L

Best Arabidopsis Sequence Match ( AT5G54390.1 )
(BLAST)

001: MAVDSLETEI DTAVRVVHLA SSLCVKVQEK LHLPNGGHVK SKDDDSPVTV ADFGVQAIVS WVLAEVFGDQ NLSIVAEEDT ETLSEADSLG LLGAVSNAVN
101: EALSEAQNYG LPKPVKPLGS SEILKAISRC NSVGGPKGRH WVLDPVDGTL GFVRGDQYAV ALALIENGKV LLGVLGCPNY PVKKECLSNG CNQAMKTKAV
201: AGSVSKGCVM YAKRGSGQAW MQPLIVGGIP ESATLLKVSS VDDPVLATVC EPVERANSNH LFTAGLANSM GVRKQPMRVY SMVKYAAIAR GDAEVFMKFA
301: QSSYKEKIWD HAAGVVIVEE AGGVVTDAGG RNLDFSKGVY LEGLDRGIIA CSGQVLHEKI IGAVYASWES SSL

Arabidopsis Description

AHLPAP-specific phosphatase HAL2-like [Source:UniProtKB/Swiss-Prot;Acc:Q38945]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.