CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84473	Canola	plastid	73.98	50.7
AT5G63990.1	Thale cress	plastid	73.17	50.42
CDY43777	Canola	plastid	73.58	50.42
Os12t0183300-01	Rice	plasma membrane	34.15	42.0
CDY31341	Canola	cytosol, mitochondrion, plastid	55.28	39.08
CDY39832	Canola	mitochondrion	55.28	39.08
CDY43778	Canola	mitochondrion	56.5	38.5
CDX84474	Canola	mitochondrion	55.69	37.95
KRH58509	Soybean	cytosol	52.44	36.86
VIT_04s0044g01480.t01	Wine grape	plastid	51.22	36.42
Solyc05g056490.2.1	Tomato	plastid	51.63	36.39
PGSC0003DMT400059942	Potato	cytosol	51.22	36.1
CDY43776	Canola	cytosol	51.22	35.49
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	51.63	35.47
Os12t0183200-00	Rice	cytosol	47.15	35.47
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	50.41	34.64
EES16781	Sorghum	plastid	48.37	33.62
Zm00001d023695_P001	Maize	extracellular	47.97	33.33
TraesCS4A01G400200.1	Wheat	cytosol, mitochondrion, plastid	47.15	32.4
KRH42388	Soybean	mitochondrion	52.85	32.18
TraesCS7A01G101500.1	Wheat	cytosol, mitochondrion, plastid	46.75	32.12
CDX84472	Canola	plastid	51.63	31.2
TraesCS5A01G119800.2	Wheat	cytosol	47.97	31.13
HORVU7Hr1G021700.1	Barley	cytosol, nucleus, plastid	47.15	29.67
EES16782	Sorghum	plastid	49.19	29.37
GSMUA_Achr2P08060_001	Banana	mitochondrion, plastid	50.41	28.97
Zm00001d023698_P002	Maize	plastid	48.37	28.74
TraesCS5D01G126800.3	Wheat	plastid	49.59	28.64
TraesCS5B01G121500.3	Wheat	mitochondrion, plastid	48.37	28.13
HORVU5Hr1G034810.1	Barley	mitochondrion, plastid	47.56	26.83
CDY18326	Canola	cytosol	39.02	25.6
CDY42446	Canola	cytosol	38.21	25.13
CDY66135	Canola	cytosol	37.4	24.73
CDY48649	Canola	cytosol	36.59	24.19
CDY44753	Canola	mitochondrion	30.89	19.59
CDY16618	Canola	mitochondrion, plastid	30.49	19.33

Protein Annotations

EnsemblPlants:CDY39833	EnsemblPlantsGene:GSBRNA2T00068656001	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:A0A078HSV0	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monophosphatase-like	PANTHER:PTHR43200
PANTHER:PTHR43200:SF7	PFAM:PF00459	PRINTS:PR00377	ProteinID:CDY39833	ProteinID:CDY39833.1	SUPFAM:SSF56655
UniParc:UPI0004EEC5C3	UniProt:A0A078HSV0	MapMan:35.1	:	:	:

Description

BnaC02g42850DBnaC02g42850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSV0]

Coordinates

chrLK032458:-:143891..146696

Molecular Weight (calculated)

26903.7 Da

IEP (calculated)

10.355

GRAVY (calculated)

-0.229

Length

246 amino acids

Sequence
(BLAST)

001: MRMIKFNYQT HLDVLRRLRF KHLLLSSDDV LKAIDSGKSE GGPNGRHWIL DPIGGTRGFI RGEQYAIGLA LLVEGKVVLA VMACPKLPLA STAVTNNTHK
101: SSPEKMGCLF FGSVGSGTYV QSLNVVDSSP VKVESYHTPV PIHNTIAKKL GIKESPIKIN SQTKYAALSR GDGEVYLRFT RKPRPESIWN HAAGSILVSE
201: AGGKVTDAEG NPLDFSKGKY LDYKRGIVVT TQKLIAKAFE SGKRIH

Best Arabidopsis Sequence Match ( AT5G63980.1 )
(BLAST)

001: MAYEKELDAA KKAASLAARL CQKVQKALLQ SDVQSKSDKS PVTVADYGSQ AVVSLVLEKE LSSEPFSLVA EEDSGDLRKD GSQDTLERIT KLVNDTLATE
101: ESFNGSTLST DDLLRAIDCG TSEGGPNGRH WVLDPIDGTK GFLRGDQYAV ALGLLEEGKV VLGVLACPNL PLASIAGNNK NKSSSDEIGC LFFATIGSGT
201: YMQLLDSKSS PVKVQVSSVE NPEEASFFES FEGAHSLHDL SSSIANKLGV KAPPVRIDSQ AKYGALSRGD GAIYLRFPHK GYREKIWDHV AGAIVVTEAG
301: GIVTDAAGKP LDFSKGKYLD LDTGIIVANE KLMPLLLKAV RDSIAEQEKA SAL

Arabidopsis Description

SAL1SAL1 phosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q42546]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.