Factsheet for Os12t0183200-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

cytosol: 23257241

plastid: 27992503

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16781	Sorghum	plastid	74.62	68.93
Zm00001d023695_P001	Maize	extracellular	72.78	67.23
Os12t0183300-01	Rice	plasma membrane	37.92	62.0
PGSC0003DMT400059942	Potato	cytosol	59.94	56.16
Solyc05g056490.2.1	Tomato	plastid	59.63	55.87
KRH58509	Soybean	cytosol	59.33	55.43
AT5G63980.1	Thale cress	cytosol, mitochondrion, plastid	58.72	54.39
VIT_04s0044g01480.t01	Wine grape	plastid	57.49	54.34
CDY43776	Canola	cytosol	58.41	53.8
Bra024255.1-P	Field mustard	cytosol	57.8	53.24
CDY31341	Canola	cytosol, mitochondrion, plastid	56.27	52.87
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	57.8	52.79
Bra037760.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	57.49	52.51
AT5G64000.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion	55.66	52.45
CDY43778	Canola	mitochondrion	57.8	52.35
Bra024257.1-P	Field mustard	mitochondrion	57.8	52.35
CDY39832	Canola	mitochondrion	55.66	52.3
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	57.19	52.23
Bra031940.1-P	Field mustard	cytosol, mitochondrion, plastid	55.66	52.15
CDX84474	Canola	mitochondrion	57.49	52.08
AT5G09290.1	Thale cress	mitochondrion	52.91	50.14
AT5G63990.1	Thale cress	plastid	54.13	49.58
Bra024256.1-P	Field mustard	plastid	53.52	48.75
CDX84473	Canola	plastid	53.52	48.75
GSMUA_Achr2P08060_001	Banana	mitochondrion, plastid	63.61	48.6
CDY43777	Canola	plastid	53.21	48.47
KRH42388	Soybean	mitochondrion	59.33	48.02
CDY39833	Canola	mitochondrion	35.47	47.15
CDX84472	Canola	plastid	58.1	46.68
Os02t0805500-01	Rice	cytosol	39.14	26.83
Os07t0558200-01	Rice	mitochondrion	35.17	26.68
Os07t0558300-01	Rice	mitochondrion	33.95	25.58

Protein Annotations

Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	UniProt:A0A0P0Y8A3	ProteinID:BAT16169.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152
GO:GO:0008441	GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0046854	GO:GO:0046872
InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	InterPro:Inositol_monophosphatase_CS	EnsemblPlantsGene:Os12g0183200	EnsemblPlants:Os12t0183200-00	PFAM:PF00459
PRINTS:PR00377	ScanProsite:PS00629	ScanProsite:PS00630	PANTHER:PTHR43200	PANTHER:PTHR43200:SF7	SUPFAM:SSF56655
UniParc:UPI000393A623	SEG:seg	:	:	:	:

Description

Similar to 3'(2'),5'-bisphosphate nucleotidase. (Os12t0183200-00)

Coordinates

chr12:-:4213199..4216353

Molecular Weight (calculated)

34523.1 Da

IEP (calculated)

5.086

GRAVY (calculated)

-0.181

Length

327 amino acids

Sequence
(BLAST)

001: MSELPSPPPP AAGNQYGAEH AAAKKAVALA ARLCKKVQQD LLKLDVQTKA DRTPVTVADY GSQVLVSVVL KIELPSNSFS MVAEEDSEDL RKDGAQEMLG
101: HITKLVNETI INDGSYSITL SKEDVLVAID GGKSEGGPSG RYWILDPIDG TKGFIRGDQY AIGLALLDEG KVVLGAMACP NLPFKSIDHN GGSSGDQVGA
201: LFSATIGCGS TVESLEGSQP QKKLGIQAPP VRIDSQAKYG AVAQGDGAIY WRFPHKRSKE AVWDHAAGSI IVTEAGGLVK DASGNDLDFS KGRYLDRDAG
301: IIATNKYLMP LVVKAAQEAM KEEGILG

Best Arabidopsis Sequence Match ( AT5G63980.1 )
(BLAST)

001: MAYEKELDAA KKAASLAARL CQKVQKALLQ SDVQSKSDKS PVTVADYGSQ AVVSLVLEKE LSSEPFSLVA EEDSGDLRKD GSQDTLERIT KLVNDTLATE
101: ESFNGSTLST DDLLRAIDCG TSEGGPNGRH WVLDPIDGTK GFLRGDQYAV ALGLLEEGKV VLGVLACPNL PLASIAGNNK NKSSSDEIGC LFFATIGSGT
201: YMQLLDSKSS PVKVQVSSVE NPEEASFFES FEGAHSLHDL SSSIANKLGV KAPPVRIDSQ AKYGALSRGD GAIYLRFPHK GYREKIWDHV AGAIVVTEAG
301: GIVTDAAGKP LDFSKGKYLD LDTGIIVANE KLMPLLLKAV RDSIAEQEKA SAL

Arabidopsis Description

SAL1SAL1 phosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q42546]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.