Factsheet for Solyc05g056490.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400059942	Potato	cytosol	96.56	96.56
KRH58509	Soybean	cytosol	76.79	76.57
VIT_04s0044g01480.t01	Wine grape	plastid	75.07	75.72
AT5G63980.1	Thale cress	cytosol, mitochondrion, plastid	75.36	74.5
Bra024255.1-P	Field mustard	cytosol	74.5	73.24
CDY43776	Canola	cytosol	74.5	73.24
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	73.93	72.07
Bra037760.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion	73.64	71.79
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	73.35	71.51
KRH42388	Soybean	mitochondrion	75.93	65.59
Os12t0183300-01	Rice	plasma membrane	36.68	64.0
CDX84472	Canola	plastid	74.21	63.64
EES16781	Sorghum	plastid	63.32	62.43
TraesCS7A01G101500.1	Wheat	cytosol, mitochondrion, plastid	63.9	62.29
TraesCS4A01G400200.1	Wheat	cytosol, mitochondrion, plastid	63.32	61.73
Zm00001d023695_P001	Maize	extracellular	62.18	61.3
CDY31341	Canola	cytosol, mitochondrion, plastid	60.74	60.92
AT5G64000.1	Thale cress	cytosol, endoplasmic reticulum, mitochondrion	60.46	60.81
Bra031940.1-P	Field mustard	cytosol, mitochondrion, plastid	60.46	60.46
Os12t0183200-00	Rice	cytosol	55.87	59.63
CDY39832	Canola	mitochondrion	59.03	59.2
CDX84473	Canola	plastid	60.17	58.5
AT5G63990.1	Thale cress	plastid	59.6	58.26
Bra024256.1-P	Field mustard	plastid	59.89	58.22
GSMUA_Achr2P08060_001	Banana	mitochondrion, plastid	71.35	58.18
CDY43777	Canola	plastid	59.6	57.94
AT5G09290.1	Thale cress	mitochondrion	57.02	57.68
Bra024257.1-P	Field mustard	mitochondrion	59.31	57.34
CDY43778	Canola	mitochondrion	59.03	57.06
CDX84474	Canola	mitochondrion	58.45	56.51
HORVU7Hr1G021700.1	Barley	cytosol, nucleus, plastid	63.04	56.27
TraesCS5A01G119800.2	Wheat	cytosol	60.74	55.94
EES16782	Sorghum	plastid	65.33	55.34
Zm00001d023698_P002	Maize	plastid	64.76	54.59
TraesCS5B01G121500.3	Wheat	mitochondrion, plastid	65.04	53.66
TraesCS5D01G126800.3	Wheat	plastid	65.33	53.52
CDY39833	Canola	mitochondrion	36.39	51.63
HORVU5Hr1G034810.1	Barley	mitochondrion, plastid	64.18	51.38
Solyc12g013560.1.1	Tomato	cytosol	43.55	39.69
Solyc02g078860.2.1	Tomato	plastid	44.41	34.6
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	27.79	26.87
Solyc02g079270.2.1	Tomato	extracellular	31.81	26.62

Protein Annotations

KEGG:00920+3.1.3.7	MapMan:27.5.5	Gene3D:3.30.540.10	Gene3D:3.40.190.80	InterPro:Bisphos_HAL2	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0006790	GO:GO:0008150	GO:GO:0008152	GO:GO:0008441
GO:GO:0009987	GO:GO:0016311	GO:GO:0016787	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like
InterPro:Inositol_monophosphatase_CS	UniProt:K4C2X3	PFAM:PF00459	PRINTS:PR00377	ScanProsite:PS00629	ScanProsite:PS00630
PANTHER:PTHR43200	PANTHER:PTHR43200:SF7	SUPFAM:SSF56655	EnsemblPlantsGene:Solyc05g056490.2	EnsemblPlants:Solyc05g056490.2.1	TIGRFAMs:TIGR01330
UniParc:UPI000276591F	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:65760759..65766726

Molecular Weight (calculated)

37197.0 Da

IEP (calculated)

4.904

GRAVY (calculated)

-0.177

Length

349 amino acids

Sequence
(BLAST)

001: MSYDKELDAA KNAASLAARL CQKVQKALLQ ADVQSKSDKS PVTVADYGSQ AVVSVVLQKE LCSASFSLVA EEDSGDLRNE EGKSTLQRIM KLVNETLASD
101: GTYGTAPLSE EDVLAAIDSG RSEGGPSGQH WVLDPIDGTK GFLRGDQYAI ALGLLDEGKV VLGVLACPNL PLSSLASHNL QDDQDKVGCL FYAQVGSGTY
201: MQSLDGSTPI KVHVTDLDNP EEASFFESFE AAHSLHDLSS LIAKKLGVKA PPVRIDSQAK YGALSRGDGA IYLRFPHKGY REKIWDHAAG YLVVAEAGGV
301: VSDAAGNPLD FSKGRYLDLH EGIIVTNQKL MPALLKAVKE SLNEKASSL

Best Arabidopsis Sequence Match ( AT5G63980.1 )
(BLAST)

001: MAYEKELDAA KKAASLAARL CQKVQKALLQ SDVQSKSDKS PVTVADYGSQ AVVSLVLEKE LSSEPFSLVA EEDSGDLRKD GSQDTLERIT KLVNDTLATE
101: ESFNGSTLST DDLLRAIDCG TSEGGPNGRH WVLDPIDGTK GFLRGDQYAV ALGLLEEGKV VLGVLACPNL PLASIAGNNK NKSSSDEIGC LFFATIGSGT
201: YMQLLDSKSS PVKVQVSSVE NPEEASFFES FEGAHSLHDL SSSIANKLGV KAPPVRIDSQ AKYGALSRGD GAIYLRFPHK GYREKIWDHV AGAIVVTEAG
301: GIVTDAAGKP LDFSKGKYLD LDTGIIVANE KLMPLLLKAV RDSIAEQEKA SAL

Arabidopsis Description

SAL1SAL1 phosphatase [Source:UniProtKB/Swiss-Prot;Acc:Q42546]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.