Factsheet for Solyc02g079270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	61.87	71.47
Bra029552.1-P	Field mustard	mitochondrion, plastid	55.16	59.28
CDY16618	Canola	mitochondrion, plastid	55.16	59.28
CDY44753	Canola	mitochondrion	54.68	58.76
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	45.32	58.7
KRH10744	Soybean	plastid	56.12	58.06
AT4G05090.1	Thale cress	mitochondrion	54.44	57.18
GSMUA_Achr8P03710_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	51.08	56.35
VIT_00s0203g00060.t01	Wine grape	cytosol	57.31	54.69
HORVU2Hr1G041320.2	Barley	mitochondrion	50.6	49.18
TraesCS2B01G233600.1	Wheat	mitochondrion	50.6	49.18
TraesCS2A01G206300.1	Wheat	mitochondrion	50.12	49.06
TraesCS2D01G209700.1	Wheat	mitochondrion	50.36	48.95
Os07t0558200-01	Rice	mitochondrion	49.88	48.26
TraesCS6B01G260100.1	Wheat	mitochondrion	46.76	45.45
Os07t0558300-01	Rice	mitochondrion	47.24	45.39
EES17739	Sorghum	mitochondrion	47.72	45.33
OQU75627	Sorghum	mitochondrion	37.89	44.63
HORVU6Hr1G059850.1	Barley	mitochondrion	47.96	43.57
TraesCS6D01G216000.1	Wheat	mitochondrion	46.76	43.53
Zm00001d021762_P001	Maize	plastid	25.42	43.27
TraesCS6A01G233100.1	Wheat	mitochondrion	46.76	42.58
Solyc05g056490.2.1	Tomato	plastid	26.62	31.81
Solyc12g013560.1.1	Tomato	cytosol	27.82	30.29
Solyc02g078860.2.1	Tomato	plastid	27.82	25.89

Protein Annotations

EnsemblPlants:Solyc02g079270.2.1	EnsemblPlantsGene:Solyc02g079270.2	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	PANTHER:PTHR43200
PANTHER:PTHR43200:SF4	PFAM:PF00459	ScanProsite:PS00629	SEG:seg	SUPFAM:SSF56655	UniParc:UPI0002768870
UniProt:K4B9F1	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2:+:43872013..43880720

Molecular Weight (calculated)

45780.1 Da

IEP (calculated)

6.360

GRAVY (calculated)

0.061

Length

417 amino acids

Sequence
(BLAST)

001: MDLLRCSGVR FPVTPLLRPF RTEIRPCFAA VRSSLSLPFP EQKAKYYREL EAAVDVVERA CRLCVDVKSL LFSDDDKILE KNDQTPVTIA DFGVQALVSL
101: EMNRLFPSIP LVAEEDSSFL RSTNLVGAVV DVVANKATFR DEVTEDSVLK AIDRGGKDAY NFGPNPATYW VLDPIDGTRG FVKGVEALYV VALALVVEGQ
201: IVLGVMGCPN WDEDYFVICV TGVQETGNNF SRSGMIMVSH VGCGTWKQRL SHKLTIELSQ SWTRCSVDGC QVLKEARFCT PESQKWESFP LSSSFNAKTD
301: SEKIGKGDIL LVPACCGSLC KYMMVASGRA SVFLLRATTR KVMKKISGYA PAWDHAVGII CVHEAGGKVT DWEGSSIDFA ADQVARRTIF PSGGFLVTNY
401: ILHNQILGLI SSNPSIN

Best Arabidopsis Sequence Match ( AT4G05090.1 )
(BLAST)

001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL

Arabidopsis Description

3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.