Factsheet for VIT_00s0203g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	46.68	63.35
Bra029552.1-P	Field mustard	mitochondrion, plastid	54.0	60.82
CDY16618	Canola	mitochondrion, plastid	54.0	60.82
GSMUA_Achr8P03710_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	52.4	60.58
CDY44753	Canola	mitochondrion	53.78	60.57
KRH10744	Soybean	plastid	54.92	59.55
AT4G05090.1	Thale cress	mitochondrion	53.55	58.94
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	48.51	58.73
Solyc02g079270.2.1	Tomato	extracellular	54.69	57.31
HORVU2Hr1G041320.2	Barley	mitochondrion	52.4	53.38
TraesCS2A01G206300.1	Wheat	mitochondrion	51.72	53.05
TraesCS2B01G233600.1	Wheat	mitochondrion	51.72	52.68
TraesCS2D01G209700.1	Wheat	mitochondrion	51.72	52.68
Os07t0558200-01	Rice	mitochondrion	50.8	51.51
TraesCS6B01G260100.1	Wheat	mitochondrion	49.66	50.58
EES17739	Sorghum	mitochondrion	50.34	50.11
TraesCS6D01G216000.1	Wheat	mitochondrion	50.34	49.11
Os07t0558300-01	Rice	mitochondrion	48.05	48.39
HORVU6Hr1G059850.1	Barley	mitochondrion	50.57	48.15
Zm00001d021762_P001	Maize	plastid	26.54	47.35
TraesCS6A01G233100.1	Wheat	mitochondrion	49.43	47.16
OQU75627	Sorghum	mitochondrion	37.53	46.33
VIT_04s0044g01480.t01	Wine grape	plastid	24.94	31.5
VIT_19s0014g03380.t01	Wine grape	cytosol, endoplasmic reticulum	27.23	31.23
VIT_00s0301g00050.t01	Wine grape	cytosol	27.0	30.1

Protein Annotations

EntrezGene:100854808	wikigene:100854808	Gene3D:3.30.540.10	Gene3D:3.40.190.80	MapMan:35.1	ProteinID:CBI40861
ProteinID:CBI40861.3	UniProt:D7UDP6	EMBL:FN596764	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	EntrezGene:LOC100854808	wikigene:LOC100854808
PFAM:PF00459	ScanProsite:PS00629	PANTHER:PTHR43200	PANTHER:PTHR43200:SF4	SUPFAM:SSF56655	UniParc:UPI0001986183
ArrayExpress:VIT_00s0203g00060	EnsemblPlantsGene:VIT_00s0203g00060	EnsemblPlants:VIT_00s0203g00060.t01	unigene:Vvi.21609	RefSeq:XP_003635071	RefSeq:XP_003635071.1

Description

No Description!

Coordinates

chrUn:+:11869351..11875353

Molecular Weight (calculated)

47944.8 Da

IEP (calculated)

5.742

GRAVY (calculated)

0.057

Length

437 amino acids

Sequence
(BLAST)

001: MSGQCSISEL WGQSSLIEAA LHHLPAMGLL HHCSPVPTVR FLITHRIIMP LRYSSPRLLT VRSSLPFPTQ KAKYHRELEA AVHVVERACR LCVDVKRSLL
101: SGDGRILEKN DQTPVTVADF GVQALISLEL GKLFPSIPLV AEEDSAFLRS NNLADLVVDA VTGKAKFGDK QLTHDDVLDA IDRGGKDAFT FGANPATYWV
201: LDPIDGTRGF LKGCEALYVV GLALVVEGEI VLGVMGCPNW QEDLSSTEVQ EDENKPSGPG IIMVSHVGCG TWIKRFYNIL DNSPNMPDCW NRSFVDQCCL
301: VHEARFCIPE SQTWESLPLS DVKASADGIS IADKEILLLP TCCGSLCKYL MVASGRASVF FLRARSEKTI KVWDHAVGVI CVHEAGGKVT DWNGSQLDIE
401: VDQVERRVIF PSGGILVSNG NLHDRILEMI SSRLSFS

Best Arabidopsis Sequence Match ( AT4G05090.1 )
(BLAST)

001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL

Arabidopsis Description

3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.