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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029552.1-P Field mustard mitochondrion, plastid 82.37 84.28
CDY16618 Canola mitochondrion, plastid 82.37 84.28
CDY44753 Canola mitochondrion 81.61 83.51
Solyc02g079250.2.1 Tomato mitochondrion, plastid 52.39 57.62
KRH10744 Soybean plastid 58.44 57.57
KRH21584 Soybean cytosol, mitochondrion, peroxisome 46.6 57.45
GSMUA_Achr8P03710_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 53.9 56.61
Solyc02g079270.2.1 Tomato extracellular 57.18 54.44
VIT_00s0203g00060.t01 Wine grape cytosol 58.94 53.55
TraesCS2A01G206300.1 Wheat mitochondrion 52.64 49.06
Os07t0558200-01 Rice mitochondrion 53.15 48.96
TraesCS2B01G233600.1 Wheat mitochondrion 52.9 48.95
HORVU2Hr1G041320.2 Barley mitochondrion 52.9 48.95
TraesCS2D01G209700.1 Wheat mitochondrion 52.14 48.25
EES17739 Sorghum mitochondrion 51.13 46.24
Zm00001d021762_P001 Maize plastid 28.21 45.71
Os07t0558300-01 Rice mitochondrion 49.62 45.39
TraesCS6B01G260100.1 Wheat mitochondrion 48.87 45.22
OQU75627 Sorghum mitochondrion 38.79 43.5
TraesCS6D01G216000.1 Wheat mitochondrion 48.61 43.08
HORVU6Hr1G059850.1 Barley mitochondrion 48.36 41.83
TraesCS6A01G233100.1 Wheat mitochondrion 48.11 41.7
AT5G64000.1 Thale cress cytosol, endoplasmic reticulum, mitochondrion 28.46 32.56
AT5G63980.1 Thale cress cytosol, mitochondrion, plastid 28.21 31.73
AT5G63990.1 Thale cress plastid 27.96 31.09
AT5G09290.1 Thale cress mitochondrion 26.45 30.43
AT5G54390.1 Thale cress cytosol 27.46 29.22
Protein Annotations
Gene3D:3.30.540.10Gene3D:3.40.190.80MapMan:35.1EntrezGene:825853ProteinID:AAD48973.1EMBL:AC012392
ProteinID:AEE82476.1EMBL:AK175301ArrayExpress:AT4G05090EnsemblPlantsGene:AT4G05090RefSeq:AT4G05090TAIR:AT4G05090
RefSeq:AT4G05090-TAIR-GEnsemblPlants:AT4G05090.1TAIR:AT4G05090.1EMBL:AY085591Unigene:At.33920ProteinID:CAB81051.1
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008441
GO:GO:0009507GO:GO:0009536GO:GO:0009987GO:GO:0016311GO:GO:0016787GO:GO:0046854
GO:GO:0046872InterPro:Inositol_monoP_metal-BSInterPro:Inositol_monophosphatase-likeRefSeq:NP_192418.1PFAM:PF00459PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00629
PANTHER:PTHR43200PANTHER:PTHR43200:SF4UniProt:Q682R6UniProt:Q9M0Y6SUPFAM:SSF56655UniParc:UPI00000AB66F
SEG:seg:::::
Description
3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
Coordinates
chr4:+:2609066..2611762
Molecular Weight (calculated)
43533.2 Da
IEP (calculated)
6.055
GRAVY (calculated)
-0.010
Length
397 amino acids
Sequence
(BLAST)
001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.