Factsheet for TraesCS6B01G260100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G233100.1	Wheat	mitochondrion	94.64	88.65
HORVU6Hr1G059850.1	Barley	mitochondrion	88.58	82.79
TraesCS6D01G216000.1	Wheat	mitochondrion	84.85	81.25
EES17739	Sorghum	mitochondrion	72.96	71.3
TraesCS2B01G233600.1	Wheat	mitochondrion	70.16	70.16
Os07t0558200-01	Rice	mitochondrion	65.5	65.2
Zm00001d021762_P001	Maize	plastid	35.2	61.63
Os07t0558300-01	Rice	mitochondrion	58.04	57.37
GSMUA_Achr8P03710_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	48.72	55.29
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	38.93	51.86
CDY44753	Canola	mitochondrion	45.22	50.0
CDY16618	Canola	mitochondrion, plastid	45.22	50.0
Bra029552.1-P	Field mustard	mitochondrion, plastid	45.22	50.0
VIT_00s0203g00060.t01	Wine grape	cytosol	50.58	49.66
KRH10744	Soybean	plastid	46.15	49.13
AT4G05090.1	Thale cress	mitochondrion	45.22	48.87
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	39.86	47.37
Solyc02g079270.2.1	Tomato	extracellular	45.45	46.76
TraesCS5B01G121500.3	Wheat	mitochondrion, plastid	27.97	28.37
TraesCS6B01G411500.1	Wheat	plastid	27.04	24.73

Protein Annotations

EnsemblPlants:TraesCS6B01G260100.1	EnsemblPlantsGene:TraesCS6B01G260100	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like	PANTHER:PTHR43200
PANTHER:PTHR43200:SF4	PFAM:PF00459	ScanProsite:PS00629	SEG:seg	SUPFAM:SSF56655	TIGR:cd01517
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:470786052..470795318

Molecular Weight (calculated)

46285.5 Da

IEP (calculated)

5.381

GRAVY (calculated)

0.049

Length

429 amino acids

Sequence
(BLAST)

001: MPLLHLSLPP HRLLVVRQCR LIAPPLHPPS RLSVRAAAAA PVAHEVCALP FPPDRTSHHR ELAAAVASVE RACRLCVDVR ASMLVGDEKI LEKNDQTHVT
101: IADFGVQALI SFELQQLFPS IPLVAEEDSA FIRSSSATDS NSNTLVESIS SFVSKEVSNN GPPLTHDDVL RAIDRGGKDV VSFDSNPATY WLLDPIDGTK
201: GFLKGEDSLY VVGLALVVDG KLALGVMGCP NLTDTTVGDT EDESIAAYPG HGILMVSHVG CGTWSRPMSA EIGQLTTAAD VWKRCYVDPC SVAHMARFCI
301: VDSHTWDMMP LSAHFSSTMD ESEPRDENKI LLQNSCGGSL SKYLLVACGR MSVFILLARA EKLLKAWDHA VGVICVEEAG GQTCDWSGKP LDFGADLTGR
401: RIIYPSGGVL ATNGALHDKL VEMVSENYK

Best Arabidopsis Sequence Match ( AT4G05090.1 )
(BLAST)

001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL

Arabidopsis Description

3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.