CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029552.1-P	Field mustard	mitochondrion, plastid	97.68	97.68
CDY16618	Canola	mitochondrion, plastid	97.68	97.68
AT4G05090.1	Thale cress	mitochondrion	83.51	81.61
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	47.94	57.76
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	53.35	57.34
KRH10744	Soybean	plastid	59.02	56.82
GSMUA_Achr8P03710_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	54.64	56.08
Solyc02g079270.2.1	Tomato	extracellular	58.76	54.68
VIT_00s0203g00060.t01	Wine grape	cytosol	60.57	53.78
TraesCS2B01G233600.1	Wheat	mitochondrion	55.67	50.35
HORVU2Hr1G041320.2	Barley	mitochondrion	55.67	50.35
TraesCS2A01G206300.1	Wheat	mitochondrion	55.15	50.23
TraesCS2D01G209700.1	Wheat	mitochondrion	54.9	49.65
Os07t0558200-01	Rice	mitochondrion	54.9	49.42
EES17739	Sorghum	mitochondrion	53.35	47.15
Os07t0558300-01	Rice	mitochondrion	51.03	45.62
TraesCS6B01G260100.1	Wheat	mitochondrion	50.0	45.22
Zm00001d021762_P001	Maize	plastid	28.09	44.49
TraesCS6D01G216000.1	Wheat	mitochondrion	50.26	43.53
OQU75627	Sorghum	mitochondrion	39.69	43.5
TraesCS6A01G233100.1	Wheat	mitochondrion	50.26	42.58
HORVU6Hr1G059850.1	Barley	mitochondrion	49.48	41.83
CDY31341	Canola	cytosol, mitochondrion, plastid	28.87	32.18
CDY43776	Canola	cytosol	29.38	32.11
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	29.38	31.84
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	29.38	31.84
CDY43777	Canola	plastid	29.38	31.75
CDY39832	Canola	mitochondrion	28.35	31.61
CDX84473	Canola	plastid	29.12	31.48
CDX84474	Canola	mitochondrion	28.87	31.02
CDY43778	Canola	mitochondrion	28.87	31.02
CDY39833	Canola	mitochondrion	19.59	30.89
CDY42446	Canola	cytosol	28.61	29.68
CDY18326	Canola	cytosol	28.61	29.6
CDY66135	Canola	cytosol	28.35	29.57
CDY48649	Canola	cytosol	28.09	29.3
CDX84472	Canola	plastid	30.15	28.75

Protein Annotations

EnsemblPlants:CDY44753	EnsemblPlantsGene:GSBRNA2T00080741001	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:A0A078I6J5	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like
PANTHER:PTHR43200	PANTHER:PTHR43200:SF4	PFAM:PF00459	ProteinID:CDY44753	ProteinID:CDY44753.1	ScanProsite:PS00629
SEG:seg	SUPFAM:SSF56655	UniParc:UPI0004EC0FB9	UniProt:A0A078I6J5	MapMan:35.1	:

Description

BnaC09g22270DBnaC09g22270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6J5]

Coordinates

chrLK032600:+:170155..172477

Molecular Weight (calculated)

42501.9 Da

IEP (calculated)

5.436

GRAVY (calculated)

0.002

Length

388 amino acids

Sequence
(BLAST)

001: MHILDTGARF SAVRFSPVLN PPRSRYFIVR ANLPFPKHQA KYHRELEAAI DAVDRACRLC VDVKRSLFSS KDKILEKNDQ TPVTIADFGV QALVSLELSK
101: LFPSIPLVAE EDSLFLRENN LVSSVVSEVI AKASVGDDRL SDADVLEAID RGGKDAYTFC NKPATYWVLD PIDGTRGFLK GDDALYVVGL ALVVDNEIVL
201: GVMGCPNWPG DSSDGTTGTL MLSHIGCGTW TKSLQVTCDW TRRFVDACGL VNKARFCIQD SQPWESLPLS GLFDKKIDSG DLHGNEIRLL PTCCGSLCKY
301: LMIASGRASV FLLRASTERT IKCWDHAVGI ICVHEAGGKV TDWEGVDINL EEDQSERRII FPAGGVVVSN GSLHHQLLEM ISSASPTL

Best Arabidopsis Sequence Match ( AT4G05090.1 )
(BLAST)

001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL

Arabidopsis Description

3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.