CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029552.1-P	Field mustard	mitochondrion, plastid	100.0	100.0
CDY44753	Canola	mitochondrion	97.68	97.68
AT4G05090.1	Thale cress	mitochondrion	84.28	82.37
Solyc02g079250.2.1	Tomato	mitochondrion, plastid	53.61	57.62
KRH21584	Soybean	cytosol, mitochondrion, peroxisome	47.42	57.14
KRH10744	Soybean	plastid	59.28	57.07
GSMUA_Achr8P03710_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.15	56.61
Solyc02g079270.2.1	Tomato	extracellular	59.28	55.16
VIT_00s0203g00060.t01	Wine grape	cytosol	60.82	54.0
TraesCS2B01G233600.1	Wheat	mitochondrion	55.67	50.35
HORVU2Hr1G041320.2	Barley	mitochondrion	55.67	50.35
TraesCS2A01G206300.1	Wheat	mitochondrion	55.15	50.23
Os07t0558200-01	Rice	mitochondrion	55.15	49.65
TraesCS2D01G209700.1	Wheat	mitochondrion	54.9	49.65
EES17739	Sorghum	mitochondrion	53.61	47.38
Os07t0558300-01	Rice	mitochondrion	51.29	45.85
TraesCS6B01G260100.1	Wheat	mitochondrion	50.0	45.22
Zm00001d021762_P001	Maize	plastid	28.09	44.49
TraesCS6D01G216000.1	Wheat	mitochondrion	50.52	43.75
OQU75627	Sorghum	mitochondrion	39.69	43.5
TraesCS6A01G233100.1	Wheat	mitochondrion	50.26	42.58
HORVU6Hr1G059850.1	Barley	mitochondrion	49.74	42.05
CDY43776	Canola	cytosol	29.38	32.11
CDY43777	Canola	plastid	29.64	32.03
CDY31341	Canola	cytosol, mitochondrion, plastid	28.61	31.9
CDY18727	Canola	cytosol, endoplasmic reticulum, mitochondrion	29.38	31.84
CDX81209	Canola	cytosol, endoplasmic reticulum, mitochondrion	29.38	31.84
CDX84473	Canola	plastid	29.38	31.75
CDY39832	Canola	mitochondrion	28.09	31.32
CDX84474	Canola	mitochondrion	28.87	31.02
CDY43778	Canola	mitochondrion	28.61	30.75
CDY39833	Canola	mitochondrion	19.33	30.49
CDY42446	Canola	cytosol	28.61	29.68
CDY18326	Canola	cytosol	28.61	29.6
CDY66135	Canola	cytosol	28.35	29.57
CDY48649	Canola	cytosol	28.09	29.3
CDX84472	Canola	plastid	30.15	28.75

Protein Annotations

EnsemblPlants:CDY16618	EnsemblPlantsGene:GSBRNA2T00094447001	Gene3D:3.30.540.10	Gene3D:3.40.190.80	GO:A0A078FW21	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0046854	InterPro:Inositol_monoP_metal-BS	InterPro:Inositol_monophosphatase-like
PANTHER:PTHR43200	PANTHER:PTHR43200:SF4	PFAM:PF00459	ProteinID:CDY16618	ProteinID:CDY16618.1	ScanProsite:PS00629
SEG:seg	SUPFAM:SSF56655	UniParc:UPI0002542619	UniProt:A0A078FW21	MapMan:35.1	:

Description

BnaA09g19960DBnaA09g19960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW21]

Coordinates

chrLK032066:-:28154..30382

Molecular Weight (calculated)

42490.7 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.043

Length

388 amino acids

Sequence
(BLAST)

001: MHILDTGARF SAVRFSPVFN PPRSRHFTVR ANLPFPKHQA KYHRELEAAI DAVDRACRLC VDVKRSLFSS KDKILEKNDQ TPVTIADFGV QALVSLELSK
101: LFPSIPLVAE EDSLFLRENN LVSSVVSEVI AKASVGDDRL SDADVLEAID RGGKDAYTFC NKPATYWVLD PIDGTRGFLK GDDALYVVGL ALVVDNEIVL
201: GVMGCPNWPG DSSDGTTGTL MLSHIGCGTW TKNLQVSGDW TRRFVDACGL VNKARFCIQD SQPWESLPLS GLFDTKIDSG DLHGNEIRLL PTCCGSLCKY
301: LMIASGRASV FLLRARTERT IKSWDHAVGI ICVHEAGGKV TDWEGVDINL EEDQSERRII FPAGGVVVSN GSLHHQLLEM ISSASPTL

Best Arabidopsis Sequence Match ( AT4G05090.1 )
(BLAST)

001: MYILDTGARF SAVRFSPVFN PPPTSLRRRY FIVRANLPFP KHQAKYHKEL EVAIDAVDRA CRLCVDVKRS LFSSKEKIVE KNDQTPVTIA DFGVQALVSL
101: ELSKLFPSIP LVAEEDSHFV RANNLVSSVV SEVKSKASIG DNHLSDADVL EAIDRGGKDA YTFCNKPATY WVLDPIDGTR GFLKGDEALY VVGLALVVDN
201: EIVLGVMGCP NWPGDSSDGS TGTLMLSHIG CGTWTKKLQN VSGNVAGDWI RCFVDACVLM NKARFCIQES QTWESLPLSG FFDASTVSED LKHKEILLLP
301: TCCGSLCKYL MVASGRASVF LLRAKTQRTI KSWDHAVGII CVHEAGGKVT DWEGDEINLE EDQSERRLIF PAGGVVVSNG SLHNQILEMI SSASPTL

Arabidopsis Description

3'(2'),5'-bisphosphate nucleotidase-like protein [Source:UniProtKB/TrEMBL;Acc:Q682R6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.