Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05647 | Sorghum | cytosol | 96.63 | 96.63 |
| Zm00001d017793_P001 | Maize | cytosol | 94.53 | 94.53 |
| Os02t0708400-01 | Rice | plasma membrane | 89.9 | 90.15 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 88.36 | 88.86 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 88.22 | 88.84 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 88.36 | 88.73 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 87.8 | 88.17 |
| GSMUA_Achr10P... | Banana | cytosol | 70.69 | 76.36 |
| GSMUA_Achr2P09630_001 | Banana | nucleus | 68.86 | 68.67 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 68.02 | 65.72 |
| Solyc03g114320.2.1 | Tomato | cytosol | 65.22 | 63.7 |
| PGSC0003DMT400062960 | Potato | cytosol | 65.22 | 63.7 |
| KRH63534 | Soybean | nucleus | 63.39 | 62.26 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 58.49 | 62.24 |
| KRH56614 | Soybean | cytosol | 59.89 | 60.83 |
| KRG93305 | Soybean | cytosol | 59.05 | 60.14 |
| CDY58518 | Canola | cytosol | 54.28 | 58.9 |
| CDX86457 | Canola | cytosol | 54.7 | 58.73 |
| Bra025315.1-P | Field mustard | cytosol | 54.7 | 58.73 |
| AT3G27960.1 | Thale cress | cytosol | 54.42 | 58.52 |
| KRH54405 | Soybean | cytosol | 61.71 | 58.43 |
| PGSC0003DMT400001405 | Potato | cytosol | 57.36 | 57.12 |
| Solyc02g086840.2.1 | Tomato | cytosol | 56.66 | 56.82 |
| AT1G27500.2 | Thale cress | cytosol | 52.03 | 56.13 |
| CDY27619 | Canola | nucleus | 51.33 | 55.54 |
| Bra032832.1-P | Field mustard | nucleus | 51.33 | 55.54 |
| Zm00001d054069_P001 | Maize | plasma membrane | 45.72 | 54.88 |
| CDX90092 | Canola | cytosol, mitochondrion | 9.54 | 54.4 |
| Zm00001d014961_P001 | Maize | extracellular, mitochondrion, plasma membrane | 46.28 | 53.92 |
| KRH57064 | Soybean | cytosol | 54.28 | 53.01 |
| CDY56191 | Canola | cytosol | 52.88 | 52.95 |
| KRH03299 | Soybean | cytosol | 27.07 | 48.37 |
| Zm00001d051893_P001 | Maize | mitochondrion | 19.64 | 22.76 |
| Zm00001d027683_P001 | Maize | mitochondrion | 16.41 | 20.24 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:100191930 | MapMan:21.1.1.4.3 | ProteinID:AQK54599.1 | ProteinID:AQK54601.1 | UniProt:B4FAP9 |
| EMBL:BT034187 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00017B6138 | EnsemblPlantsGene:Zm00001d051589 | EnsemblPlants:Zm00001d051589_P001 | EnsemblPlants:Zm00001d051589_T001 |
| SEG:seg | : | : | : | : | : |
Description
Tetratricopeptide repeat (TPR)-like superfamily protein
Coordinates
chr4:-:163588760..163592644
Molecular Weight (calculated)
77502.2 Da
IEP (calculated)
4.802
GRAVY (calculated)
-0.446
Length
713 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGITEDGVV AEEVPNGVNF SPQNESLPAP KSTAASTMAG SMQSEALEMH VEASGAGEPS IEQLYNNVCE MESSSEGGSP SRESFGSDGE ESRIDSELRH
101: LVAGEMEAMK VIEEEEENGS VANVVPPAPA ENGTPVKEHS SSSSKKSKKA SKSQLESDAS VGLNGKASTE EGESEVSKPA SRVGRRRKSN ANPQSGTEDA
201: GLDNPDLGPF LLKHARDLIA SENPRRALKY ALRATKSFEK CAGGKPSLNL VMSLHVVAAI YCNLGKYEEA VPVLHRSIEI PVIEEGQEHA LAKFSGCMQL
301: GDTYGMLGQT AHSLQWYASG LEIQKQTLGE QDPRVGETCR YLAEAHVQAL QLDEAQRLCQ IALDIHREHR ETASLEETAD RRLMGLICDT KGDHEAALEH
401: LVMASMSMVA NGQETEVASV DCSIGDIYLS LGRYDEAVFA YQKALTVFKT SKGENHATVA SVFVRLADLY NKTGKLRESK SYCENALKIY QKPIPGTSLE
501: EIATGLTDVS AIYETMNEHE QALKLLQKAL KMYNNSAGQQ STIAGIEAQM GVLHYILGNY GESYDSFKSA IAKLRTCGEK KSAFFGIALN QMGLACVQRY
601: SINEAAELFE EARTVLEQEY GPYHPDTLGV YSNLAGTYDA MGRLDEAIEI LEYVVGMREE KLGTANPDVD DEKRRLGELL KEAGRVRSRK AKSLENLLET
701: NPYIATKRNA VAA
101: LVAGEMEAMK VIEEEEENGS VANVVPPAPA ENGTPVKEHS SSSSKKSKKA SKSQLESDAS VGLNGKASTE EGESEVSKPA SRVGRRRKSN ANPQSGTEDA
201: GLDNPDLGPF LLKHARDLIA SENPRRALKY ALRATKSFEK CAGGKPSLNL VMSLHVVAAI YCNLGKYEEA VPVLHRSIEI PVIEEGQEHA LAKFSGCMQL
301: GDTYGMLGQT AHSLQWYASG LEIQKQTLGE QDPRVGETCR YLAEAHVQAL QLDEAQRLCQ IALDIHREHR ETASLEETAD RRLMGLICDT KGDHEAALEH
401: LVMASMSMVA NGQETEVASV DCSIGDIYLS LGRYDEAVFA YQKALTVFKT SKGENHATVA SVFVRLADLY NKTGKLRESK SYCENALKIY QKPIPGTSLE
501: EIATGLTDVS AIYETMNEHE QALKLLQKAL KMYNNSAGQQ STIAGIEAQM GVLHYILGNY GESYDSFKSA IAKLRTCGEK KSAFFGIALN QMGLACVQRY
601: SINEAAELFE EARTVLEQEY GPYHPDTLGV YSNLAGTYDA MGRLDEAIEI LEYVVGMREE KLGTANPDVD DEKRRLGELL KEAGRVRSRK AKSLENLLET
701: NPYIATKRNA VAA
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.