Factsheet for Zm00001d013041_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

peroxisome 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034528_P001	Maize	mitochondrion	50.85	94.44
KXG37312	Sorghum	mitochondrion	50.85	94.44
Zm00001d005114_P001	Maize	mitochondrion	44.02	83.74
Os03t0806900-01	Rice	mitochondrion	44.44	82.54
TraesCS5A01G456800.1	Wheat	golgi, mitochondrion, unclear	42.73	81.3
Bra011350.1-P	Field mustard	mitochondrion	34.62	77.88
VIT_04s0008g05000.t01	Wine grape	cytosol	40.17	77.05
Solyc08g067020.2.1	Tomato	plastid	40.17	76.42
CDY05350	Canola	mitochondrion	40.17	76.42
PGSC0003DMT400074807	Potato	mitochondrion	40.17	76.42
GSMUA_Achr1P13480_001	Banana	mitochondrion	39.74	75.61
Bra020499.1-P	Field mustard	mitochondrion	39.74	75.61
AT5G25450.1	Thale cress	mitochondrion	38.89	74.59
GSMUA_Achr9P07800_001	Banana	mitochondrion	38.46	73.17
CDX75248	Canola	mitochondrion	38.03	72.95
CDX68850	Canola	mitochondrion	38.03	72.95
AT4G32470.1	Thale cress	mitochondrion	37.61	72.13
CDY39888	Canola	mitochondrion	37.18	71.31
CDY23327	Canola	mitochondrion	36.75	70.49
Bra040079.1-P	Field mustard	mitochondrion	36.75	70.49
KRH16011	Soybean	mitochondrion	36.32	69.67
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	35.47	68.03
CDY70525	Canola	mitochondrion	34.19	57.55
CDY05492	Canola	mitochondrion	34.19	57.55
HORVU5Hr1G109620.2	Barley	plastid	34.62	51.59

Protein Annotations

KEGG:00061+2.3.1.180	KEGG:00062+2.3.1.199	Gene3D:1.10.1090.10	EntrezGene:100383274	MapMan:2.4.3.6	InterPro:3-ktacl-CoA_syn
Gene3D:3.40.47.10	UniProt:A0A1D6GF76	InterPro:ACP_syn_III_C	ProteinID:AQK62222.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005750
GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0016747
InterPro:IPR016039	InterPro:IPR036544	PFAM:PD008153	PFAM:PF02271	PFAM:PF08541	PANTHER:PTHR31561
PANTHER:PTHR31561:SF7	InterPro:QCR7	InterPro:QCR7_sf	SUPFAM:SSF53901	SUPFAM:SSF81524	InterPro:Thiolase-like
UniParc:UPI0008452FA3	EnsemblPlantsGene:Zm00001d013041	EnsemblPlants:Zm00001d013041_P003	EnsemblPlants:Zm00001d013041_T003	SEG:seg	:

Description

Cytochrome b-c1 complex subunit 7

Coordinates

chr5:-:3613364..3618413

Molecular Weight (calculated)

26990.1 Da

IEP (calculated)

10.756

GRAVY (calculated)

-0.429

Length

234 amino acids

Sequence
(BLAST)

001: MSSMMNALSN WLVNPRRNPL ARLHMHTVSS RLRKYGLRYD DLYDPYFDLD IKEALGRLPR EVVDARIQRL KRAMDLSMKH QYLPEDLQRL APRILPAREL
101: ARFASRLLLR KLLPGPPRNK HAGCPKIDFK AGVDHFCLHP GGTVVIEAVR KSLRLTAHDV EPAGMTLHRW GNTSASSLWY VLSYMEAKWR LKRGDRAQQV
201: PFRGYLSDML ALVKKENAER EALGALPLYQ RTLP

Best Arabidopsis Sequence Match ( AT5G25450.3 )
(BLAST)

1: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQVCFSL

Arabidopsis Description

QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.