Factsheet for Os03t0806900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 6
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 15258153
mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867
plastid: 27992503

msms PMID: 15258153 doi

AH Millar, AE Trend, JL Heazlewood

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, the University of Western Australia, Crawley 6009, Western Australia, Australia.

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034528_P001	Maize	mitochondrion	80.16	80.16
KXG37312	Sorghum	mitochondrion	80.16	80.16
TraesCS5A01G456800.1	Wheat	golgi, mitochondrion, unclear	76.98	78.86
CDY05350	Canola	mitochondrion	70.63	72.36
Bra011350.1-P	Field mustard	mitochondrion	59.52	72.12
Bra020499.1-P	Field mustard	mitochondrion	69.84	71.54
Solyc08g067020.2.1	Tomato	plastid	69.84	71.54
PGSC0003DMT400074807	Potato	mitochondrion	69.05	70.73
GSMUA_Achr1P13480_001	Banana	mitochondrion	69.05	70.73
AT5G25450.1	Thale cress	mitochondrion	68.25	70.49
VIT_04s0008g05000.t01	Wine grape	cytosol	68.25	70.49
CDY39888	Canola	mitochondrion	66.67	68.85
KRH16011	Soybean	mitochondrion	66.67	68.85
CDX68850	Canola	mitochondrion	66.67	68.85
GSMUA_Achr9P07800_001	Banana	mitochondrion	66.67	68.29
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	65.08	67.21
CDY23327	Canola	mitochondrion	65.08	67.21
CDX75248	Canola	mitochondrion	65.08	67.21
Bra040079.1-P	Field mustard	mitochondrion	65.08	67.21
AT4G32470.1	Thale cress	mitochondrion	65.08	67.21
Os07t0205000-01	Rice	mitochondrion	80.95	58.29
Os08t0246400-01	Rice	mitochondrion	57.14	56.69
CDY70525	Canola	mitochondrion	61.9	56.12
CDY05492	Canola	mitochondrion	61.9	56.12
HORVU5Hr1G109620.2	Barley	plastid	64.29	51.59
Zm00001d013041_P003	Maize	mitochondrion	82.54	44.44

Protein Annotations

Gene3D:1.10.1090.10	MapMan:2.4.3.6	EntrezGene:4334506	ProteinID:AAP21435.1	ProteinID:ABF99449.1	EMBL:AK121708
ProteinID:BAF13553.1	ProteinID:BAS86954.1	ProteinID:EAZ28987.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0005750	GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0008121	GO:GO:0008150
GO:GO:0008152	GO:GO:0009060	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0034551
GO:GO:0055114	GO:GO:0070469	InterPro:IPR036544	EnsemblPlantsGene:Os03g0806900	EnsemblPlants:Os03t0806900-01	PFAM:PD008153
PFAM:PF02271	PIRSF:PIRSF000022	PANTHER:PTHR12022	UniProt:Q84M34	InterPro:QCR7	InterPro:QCR7_sf
SUPFAM:SSF81524	UniParc:UPI00001909D5	RefSeq:XP_015628054.1	SEG:seg	:	:

Description

Similar to Cytochrome-C reductase 14 kDa subunit (EC 1.10.2.2) (Fragment). (Os03t0806900-01)

Coordinates

chr3:+:33718560..33720590

Molecular Weight (calculated)

15036.2 Da

IEP (calculated)

9.963

GRAVY (calculated)

-0.846

Length

126 amino acids

Sequence
(BLAST)

001: MSSMLSAFSQ WFVNPRRNPL ARLHMQAISS RLRKYGLRYD DLYDPKHDLD IKEALERLPR EVVDARHQRL KRAMDLSMKH QYLSENDQAQ QTPFRGYLSD
101: MMDLVKKERL EREELGALPL HQRTLP

Best Arabidopsis Sequence Match ( AT5G25450.1 )
(BLAST)

001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP

Arabidopsis Description

QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.