CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040079.1-P	Field mustard	mitochondrion	100.0	100.0
CDY39888	Canola	mitochondrion	98.36	98.36
CDX75248	Canola	mitochondrion	90.98	90.98
CDX68850	Canola	mitochondrion	90.16	90.16
CDY05350	Canola	mitochondrion	85.25	84.55
Solyc08g067020.2.1	Tomato	plastid	77.05	76.42
PGSC0003DMT400074807	Potato	mitochondrion	76.23	75.61
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	74.59	74.59
KRH16011	Soybean	mitochondrion	74.59	74.59
EER96047	Sorghum	mitochondrion	71.31	70.73
Zm00001d005114_P001	Maize	mitochondrion	71.31	70.73
GSMUA_Achr1P13480_001	Banana	mitochondrion	70.49	69.92
TraesCS5A01G456800.1	Wheat	golgi, mitochondrion, unclear	68.03	67.48
Zm00001d034528_P001	Maize	mitochondrion	69.67	67.46
GSMUA_Achr9P07800_001	Banana	mitochondrion	67.21	66.67
KXG37312	Sorghum	mitochondrion	68.03	65.87
CDY70525	Canola	mitochondrion	74.59	65.47
CDY05492	Canola	mitochondrion	74.59	65.47
Os03t0806900-01	Rice	mitochondrion	67.21	65.08
Os07t0205000-01	Rice	mitochondrion	71.31	49.71
Os08t0246400-01	Rice	mitochondrion	49.18	47.24
HORVU5Hr1G109620.2	Barley	plastid	52.46	40.76
Zm00001d013041_P003	Maize	mitochondrion	70.49	36.75

Protein Annotations

Gene3D:1.10.1090.10	MapMan:2.4.3.6	GO:A0A078GE29	UniProt:A0A078GE29	EnsemblPlants:CDY23327	ProteinID:CDY23327
ProteinID:CDY23327.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0005750	GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0055114	GO:GO:0070469	EnsemblPlantsGene:GSBRNA2T00021913001
InterPro:IPR036544	PFAM:PD008153	PFAM:PF02271	PIRSF:PIRSF000022	PANTHER:PTHR12022	InterPro:QCR7
InterPro:QCR7_sf	SUPFAM:SSF81524	UniParc:UPI0002546B29	:	:	:

Description

BnaA08g12190DCytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A078GE29]

Coordinates

chrLK032142:-:535871..536914

Molecular Weight (calculated)

14713.0 Da

IEP (calculated)

10.283

GRAVY (calculated)

-0.766

Length

122 amino acids

Sequence
(BLAST)

001: MSSFLKSFLD PKKNFLARMH MKAVSTRLRR YGLRYDDTYD QYYHMDIKEA LNRLPREVVD ARNQRLKRAM DLSMKHEYLP KDLQAVQTPF RSYLQEMLAL
101: VERERKEREA LGALPLYQRT LP

Best Arabidopsis Sequence Match ( AT4G32470.1 )
(BLAST)

001: MASLLKAFID PKKNFLARMH MKAISTRLRR YGLRYDDLYD QYYSMDIKEA MNRLPREVVD ARNQRLKRAM DLSMKHEYLP KDLQAVQTPF RGYLQDMLAL
101: VERESKEREA LGALPLYQRT LP

Arabidopsis Description

QCR7-1Cytochrome b-c1 complex subunit 7-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUU5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.