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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16011 Soybean mitochondrion 97.54 97.54
AT5G25450.1 Thale cress mitochondrion 79.51 79.51
CDY05350 Canola mitochondrion 79.51 78.86
Bra020499.1-P Field mustard mitochondrion 78.69 78.05
VIT_04s0008g05000.t01 Wine grape cytosol 77.87 77.87
CDY39888 Canola mitochondrion 76.23 76.23
Solyc08g067020.2.1 Tomato plastid 75.41 74.8
Bra040079.1-P Field mustard mitochondrion 74.59 74.59
CDY23327 Canola mitochondrion 74.59 74.59
Bra011350.1-P Field mustard mitochondrion 63.11 74.04
AT4G32470.1 Thale cress mitochondrion 73.77 73.77
PGSC0003DMT400074807 Potato mitochondrion 73.77 73.17
GSMUA_Achr1P13480_001 Banana mitochondrion 73.77 73.17
CDX68850 Canola mitochondrion 71.31 71.31
CDX75248 Canola mitochondrion 71.31 71.31
GSMUA_Achr9P07800_001 Banana mitochondrion 71.31 70.73
EER96047 Sorghum mitochondrion 68.03 67.48
Zm00001d005114_P001 Maize mitochondrion 67.21 66.67
Os03t0806900-01 Rice mitochondrion 67.21 65.08
Zm00001d034528_P001 Maize mitochondrion 66.39 64.29
TraesCS5A01G456800.1 Wheat golgi, mitochondrion, unclear 64.75 64.23
KXG37312 Sorghum mitochondrion 64.75 62.7
CDY70525 Canola mitochondrion 66.39 58.27
CDY05492 Canola mitochondrion 66.39 58.27
Os07t0205000-01 Rice mitochondrion 68.03 47.43
Os08t0246400-01 Rice mitochondrion 45.08 43.31
HORVU5Hr1G109620.2 Barley plastid 51.64 40.13
Zm00001d013041_P003 Maize mitochondrion 68.03 35.47
Protein Annotations
Gene3D:1.10.1090.10EntrezGene:100527652MapMan:2.4.3.6EMBL:ACUP02010675EnsemblPlantsGene:GLYMA_17G208000GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005743GO:GO:0005750GO:GO:0006091GO:GO:0006122GO:GO:0006139
GO:GO:0006810GO:GO:0008121GO:GO:0008150GO:GO:0008152GO:GO:0009060GO:GO:0009987
GO:GO:0016020GO:GO:0016043GO:GO:0034551GO:GO:0055114GO:GO:0070469GO:GO:1902600
UniProt:I1MWP7InterPro:IPR036544EnsemblPlants:KRH05106ProteinID:KRH05106ProteinID:KRH05106.1PFAM:PD008153
PFAM:PF02271PIRSF:PIRSF000022PANTHER:PTHR12022InterPro:QCR7InterPro:QCR7_sfSUPFAM:SSF81524
UniParc:UPI0001BA82E0SEG:seg::::
Description
hypothetical protein
Coordinates
chr17:+:34093823..34096844
Molecular Weight (calculated)
14491.6 Da
IEP (calculated)
10.012
GRAVY (calculated)
-0.707
Length
122 amino acids
Sequence
(BLAST)
001: MASFLQSFLD PKKNWFAAQH MKSLSKRLRK YGLRYDDLYD PYYDLDVKEA LNRLPKEVVD ARHARLKRAI DLSMKHEYLP DNLQSMQTPF RGYLQDMLTL
101: VKRERAEREA LGGLPLYQRS IP
Best Arabidopsis Sequence Match ( AT5G25450.1 )
(BLAST)
001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP
Arabidopsis Description
QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.