Factsheet for Zm00001d005114_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96047	Sorghum	mitochondrion	96.75	96.75
Zm00001d034528_P001	Maize	mitochondrion	82.11	80.16
CDY05350	Canola	mitochondrion	78.05	78.05
Bra020499.1-P	Field mustard	mitochondrion	77.24	77.24
GSMUA_Achr1P13480_001	Banana	mitochondrion	77.24	77.24
Bra011350.1-P	Field mustard	mitochondrion	64.23	75.96
Solyc08g067020.2.1	Tomato	plastid	74.8	74.8
GSMUA_Achr9P07800_001	Banana	mitochondrion	74.8	74.8
AT5G25450.1	Thale cress	mitochondrion	73.98	74.59
PGSC0003DMT400074807	Potato	mitochondrion	73.98	73.98
CDY39888	Canola	mitochondrion	71.54	72.13
AT4G32470.1	Thale cress	mitochondrion	70.73	71.31
VIT_04s0008g05000.t01	Wine grape	cytosol	70.73	71.31
CDY23327	Canola	mitochondrion	70.73	71.31
Bra040079.1-P	Field mustard	mitochondrion	70.73	71.31
CDX75248	Canola	mitochondrion	69.92	70.49
CDX68850	Canola	mitochondrion	69.92	70.49
KRH16011	Soybean	mitochondrion	68.29	68.85
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	66.67	67.21
Os07t0205000-01	Rice	mitochondrion	93.5	65.71
Os08t0246400-01	Rice	mitochondrion	65.04	62.99
CDY70525	Canola	mitochondrion	65.04	57.55
CDY05492	Canola	mitochondrion	65.04	57.55
Zm00001d013041_P003	Maize	mitochondrion	83.74	44.02

Protein Annotations

Gene3D:1.10.1090.10	EntrezGene:103649017	MapMan:2.4.3.6	UniProt:B6TMP9	EMBL:EU966264	EMBL:EU973896
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743
GO:GO:0005750	GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0055114	GO:GO:0070469	InterPro:IPR036544	ProteinID:ONM20354.1
PFAM:PD008153	PFAM:PF02271	PIRSF:PIRSF000022	PANTHER:PTHR12022	InterPro:QCR7	InterPro:QCR7_sf
SUPFAM:SSF81524	UniParc:UPI000182D641	EnsemblPlantsGene:Zm00001d005114	EnsemblPlants:Zm00001d005114_P001	EnsemblPlants:Zm00001d005114_T001	SEG:seg

Description

Cytochrome b-c1 complex subunit 7-2

Coordinates

chr2:-:159058949..159063855

Molecular Weight (calculated)

14482.6 Da

IEP (calculated)

10.293

GRAVY (calculated)

-0.552

Length

123 amino acids

Sequence
(BLAST)

001: MLSKLSAWFV NPRRNPLARL HRNAVASRLR KYGLRYDDLY DPYHDLDIKE ALARLPREVV DARNQRLKRA MDLSMKHQYL PDDVQAIQTP FRSYLFDMLA
101: LVKKESAERE ALGALPLYQR TIP

Best Arabidopsis Sequence Match ( AT5G25450.1 )
(BLAST)

001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP

Arabidopsis Description

QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.