CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020499.1-P	Field mustard	mitochondrion	99.19	99.19
AT5G25450.1	Thale cress	mitochondrion	91.06	91.8
CDY39888	Canola	mitochondrion	86.18	86.89
CDY23327	Canola	mitochondrion	84.55	85.25
CDX68850	Canola	mitochondrion	82.11	82.79
CDX75248	Canola	mitochondrion	82.11	82.79
VIT_04s0008g05000.t01	Wine grape	cytosol	82.11	82.79
GSMUA_Achr1P13480_001	Banana	mitochondrion	80.49	80.49
KRH16011	Soybean	mitochondrion	79.67	80.33
KRH05106	Soybean	endoplasmic reticulum, mitochondrion	78.86	79.51
Zm00001d005114_P001	Maize	mitochondrion	78.05	78.05
EER96047	Sorghum	mitochondrion	76.42	76.42
CDY70525	Canola	mitochondrion	86.18	76.26
CDY05492	Canola	mitochondrion	86.18	76.26
GSMUA_Achr9P07800_001	Banana	mitochondrion	75.61	75.61
TraesCS5A01G456800.1	Wheat	golgi, mitochondrion, unclear	73.17	73.17
Zm00001d034528_P001	Maize	mitochondrion	73.98	72.22
Os03t0806900-01	Rice	mitochondrion	72.36	70.63
KXG37312	Sorghum	mitochondrion	72.36	70.63
Os07t0205000-01	Rice	mitochondrion	78.86	55.43
Os08t0246400-01	Rice	mitochondrion	53.66	51.97
HORVU5Hr1G109620.2	Barley	plastid	57.72	45.22
Zm00001d013041_P003	Maize	mitochondrion	76.42	40.17

Protein Annotations

Gene3D:1.10.1090.10	MapMan:2.4.3.6	GO:A0A078ETI8	EnsemblPlants:CDY05350	ProteinID:CDY05350	ProteinID:CDY05350.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005750
GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	EnsemblPlantsGene:GSBRNA2T00120214001	InterPro:IPR036544	PFAM:PD008153	PFAM:PF02271	PIRSF:PIRSF000022
PANTHER:PTHR12022	InterPro:QCR7	InterPro:QCR7_sf	SUPFAM:SSF81524	UniParc:UPI0004EEA8DB	SEG:seg

Description

BnaC02g40580D

Coordinates

chrLK031961:-:553471..554547

Molecular Weight (calculated)

14625.9 Da

IEP (calculated)

10.121

GRAVY (calculated)

-0.641

Length

123 amino acids

Sequence
(BLAST)

001: MASSFLQRLV DPKKNFLARL HMKSVSNRLR KYGLRYDDLY DPMYDLDIKE ALNRLPREVV DARNQRLKRA MDLSMKHEYL PDDLQAVQTP FRSYLQEMLA
101: LVKRERAERE ALGALPLYQR TIP

Best Arabidopsis Sequence Match ( AT5G25450.1 )
(BLAST)

001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQAVQTPF RSYLQDMLAL
101: VKRERAEREA LGALPLYQRT IP

Arabidopsis Description

QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.