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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G456800.1 Wheat golgi, mitochondrion, unclear 57.96 73.98
Os03t0806900-01 Rice mitochondrion 51.59 64.29
Zm00001d034528_P001 Maize mitochondrion 49.04 61.11
KXG37312 Sorghum mitochondrion 48.41 60.32
Bra020499.1-P Field mustard mitochondrion 45.22 57.72
CDY05350 Canola mitochondrion 45.22 57.72
Solyc08g067020.2.1 Tomato plastid 44.59 56.91
PGSC0003DMT400074807 Potato mitochondrion 44.59 56.91
GSMUA_Achr1P13480_001 Banana mitochondrion 43.95 56.1
AT5G25450.1 Thale cress mitochondrion 42.68 54.92
Bra011350.1-P Field mustard mitochondrion 36.31 54.81
CDY39888 Canola mitochondrion 42.04 54.1
CDX68850 Canola mitochondrion 41.4 53.28
VIT_04s0008g05000.t01 Wine grape cytosol 41.4 53.28
GSMUA_Achr9P07800_001 Banana mitochondrion 41.4 52.85
CDY23327 Canola mitochondrion 40.76 52.46
AT4G32470.1 Thale cress mitochondrion 40.76 52.46
KRH16011 Soybean mitochondrion 40.76 52.46
CDX75248 Canola mitochondrion 40.76 52.46
Bra040079.1-P Field mustard mitochondrion 40.76 52.46
KRH05106 Soybean endoplasmic reticulum, mitochondrion 40.13 51.64
CDY70525 Canola mitochondrion 42.68 48.2
CDY05492 Canola mitochondrion 42.68 48.2
Zm00001d013041_P003 Maize mitochondrion 51.59 34.62
Protein Annotations
Gene3D:1.10.1090.10MapMan:2.4.3.6UniProt:A0A287SPB3GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0005750GO:GO:0006091GO:GO:0006122GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020EnsemblPlantsGene:HORVU5Hr1G109620EnsemblPlants:HORVU5Hr1G109620.2
InterPro:IPR036544PFAM:PD008153PFAM:PF02271PANTHER:PTHR12022InterPro:QCR7InterPro:QCR7_sf
SUPFAM:SSF81524UniParc:UPI000B475449SEG:seg:::
Description
No Description!
Coordinates
chrchr5H:+:630345983..630346552
Molecular Weight (calculated)
18011.8 Da
IEP (calculated)
10.649
GRAVY (calculated)
-0.666
Length
157 amino acids
Sequence
(BLAST)
001: TTTPTSPPPL PKSQTPKNTG DERGSPPPPS PKMTSMLSAF SQWFVNPRRN PLARIHMLTI SNRLKNYGLR YDDLYDPYFD LDIKEALTRL PREVVDARHQ
101: RLKRAMDLSM KHQYLPDDVR VRPSSCPLPP SHLRGSLSFR LACLWFVRCG HGVRVHP
Best Arabidopsis Sequence Match ( AT5G25450.2 )
(BLAST)
001: MASFLQRLVD PRKNFLARMH MKSVSNRLRR YGLRYDDLYD PLYDLDIKEA LNRLPREIVD ARNQRLMRAM DLSMKHEYLP DNLQVKRERA EREALGALPL
101: YQRTIP
Arabidopsis Description
QCR7-2Cytochrome b-c1 complex subunit 7 [Source:UniProtKB/TrEMBL;Acc:A0A178UDJ6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.